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Comprehensive Analysis of the Potential Prognostic Value of 11 Glycosylation-Related Genes in Head and Neck Squamous Cell Carcinoma and Their Correlation with PD-L1 Expression and Immune Infiltration

BACKGROUND: Head and neck squamous cell carcinoma (HNSCC) is one of the worst and most common malignant tumors. This study is aimed at studying the complex interaction between glycosylation-related genes and HNSCC. METHODS: The Cancer Genome Atlas (TCGA) contains gene expression profile data of HNSC...

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Autores principales: Chen, Langxiong, Ling, Yuefu, Yang, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9023197/
https://www.ncbi.nlm.nih.gov/pubmed/35466312
http://dx.doi.org/10.1155/2022/2786680
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author Chen, Langxiong
Ling, Yuefu
Yang, Hong
author_facet Chen, Langxiong
Ling, Yuefu
Yang, Hong
author_sort Chen, Langxiong
collection PubMed
description BACKGROUND: Head and neck squamous cell carcinoma (HNSCC) is one of the worst and most common malignant tumors. This study is aimed at studying the complex interaction between glycosylation-related genes and HNSCC. METHODS: The Cancer Genome Atlas (TCGA) contains gene expression profile data of HNSCC and normal tissues, as well as patient survival and clinical data. Combining five glycosylation-related gene sets, bioinformatics was used to analyze the expression of glycosylation-related genes in TCGA-HNSCC datasets and to identify prognostic risk markers, analyze their prognostic value, and the influence of glycosylation-related genes on the tumor immune microenvironment. RESULTS: Gene expression profiles and corresponding clinical information of 499 cases of HNSCC and 44 cases of adjacent tissues were obtained. Using 11 glycosylation-related genes to construct a prognostic risk score, the Kaplan-Meier curve analysis found that the overall survival of the high-risk group was significantly different than that of the low-risk group (P < 0.001). ROC analysis was used to evaluate the prognostic efficacy of prognostic risk markers, and the results showed that the prognostic risk markers had good efficacy in predicting the prognosis of patients. We also found that there is a correlation between glycosylation-related genes, PD-L1, and immunocyte infiltration, and there is a dynamic effect between the change in the copy number of glycosylation-related genes and the number of tumor-infiltrating immune cells. CONCLUSIONS: Our research shows that glycosylation-related prognostic risk markers may be independent risk factors for the prognosis of HNSCC. We have found that there may be subtle links between glycosylation-related genes, PD-L1, and immunocyte infiltration, which has certain significance for exploring the occurrence and development of HNSCC and exploring the research of targeted therapy.
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spelling pubmed-90231972022-04-22 Comprehensive Analysis of the Potential Prognostic Value of 11 Glycosylation-Related Genes in Head and Neck Squamous Cell Carcinoma and Their Correlation with PD-L1 Expression and Immune Infiltration Chen, Langxiong Ling, Yuefu Yang, Hong J Oncol Research Article BACKGROUND: Head and neck squamous cell carcinoma (HNSCC) is one of the worst and most common malignant tumors. This study is aimed at studying the complex interaction between glycosylation-related genes and HNSCC. METHODS: The Cancer Genome Atlas (TCGA) contains gene expression profile data of HNSCC and normal tissues, as well as patient survival and clinical data. Combining five glycosylation-related gene sets, bioinformatics was used to analyze the expression of glycosylation-related genes in TCGA-HNSCC datasets and to identify prognostic risk markers, analyze their prognostic value, and the influence of glycosylation-related genes on the tumor immune microenvironment. RESULTS: Gene expression profiles and corresponding clinical information of 499 cases of HNSCC and 44 cases of adjacent tissues were obtained. Using 11 glycosylation-related genes to construct a prognostic risk score, the Kaplan-Meier curve analysis found that the overall survival of the high-risk group was significantly different than that of the low-risk group (P < 0.001). ROC analysis was used to evaluate the prognostic efficacy of prognostic risk markers, and the results showed that the prognostic risk markers had good efficacy in predicting the prognosis of patients. We also found that there is a correlation between glycosylation-related genes, PD-L1, and immunocyte infiltration, and there is a dynamic effect between the change in the copy number of glycosylation-related genes and the number of tumor-infiltrating immune cells. CONCLUSIONS: Our research shows that glycosylation-related prognostic risk markers may be independent risk factors for the prognosis of HNSCC. We have found that there may be subtle links between glycosylation-related genes, PD-L1, and immunocyte infiltration, which has certain significance for exploring the occurrence and development of HNSCC and exploring the research of targeted therapy. Hindawi 2022-04-14 /pmc/articles/PMC9023197/ /pubmed/35466312 http://dx.doi.org/10.1155/2022/2786680 Text en Copyright © 2022 Langxiong Chen et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Chen, Langxiong
Ling, Yuefu
Yang, Hong
Comprehensive Analysis of the Potential Prognostic Value of 11 Glycosylation-Related Genes in Head and Neck Squamous Cell Carcinoma and Their Correlation with PD-L1 Expression and Immune Infiltration
title Comprehensive Analysis of the Potential Prognostic Value of 11 Glycosylation-Related Genes in Head and Neck Squamous Cell Carcinoma and Their Correlation with PD-L1 Expression and Immune Infiltration
title_full Comprehensive Analysis of the Potential Prognostic Value of 11 Glycosylation-Related Genes in Head and Neck Squamous Cell Carcinoma and Their Correlation with PD-L1 Expression and Immune Infiltration
title_fullStr Comprehensive Analysis of the Potential Prognostic Value of 11 Glycosylation-Related Genes in Head and Neck Squamous Cell Carcinoma and Their Correlation with PD-L1 Expression and Immune Infiltration
title_full_unstemmed Comprehensive Analysis of the Potential Prognostic Value of 11 Glycosylation-Related Genes in Head and Neck Squamous Cell Carcinoma and Their Correlation with PD-L1 Expression and Immune Infiltration
title_short Comprehensive Analysis of the Potential Prognostic Value of 11 Glycosylation-Related Genes in Head and Neck Squamous Cell Carcinoma and Their Correlation with PD-L1 Expression and Immune Infiltration
title_sort comprehensive analysis of the potential prognostic value of 11 glycosylation-related genes in head and neck squamous cell carcinoma and their correlation with pd-l1 expression and immune infiltration
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9023197/
https://www.ncbi.nlm.nih.gov/pubmed/35466312
http://dx.doi.org/10.1155/2022/2786680
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