Cargando…

Redesigning regulatory components of quorum-sensing system for diverse metabolic control

Quorum sensing (QS) is a ubiquitous cell–cell communication mechanism that can be employed to autonomously and dynamically control metabolic fluxes. However, since the functions of genetic components in the circuits are not fully understood, the developed QS circuits are still less sophisticated for...

Descripción completa

Detalles Bibliográficos
Autores principales: Ge, Chang, Yu, Zheng, Sheng, Huakang, Shen, Xiaolin, Sun, Xinxiao, Zhang, Yifei, Yan, Yajun, Wang, Jia, Yuan, Qipeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9023504/
https://www.ncbi.nlm.nih.gov/pubmed/35449138
http://dx.doi.org/10.1038/s41467-022-29933-x
_version_ 1784690366050467840
author Ge, Chang
Yu, Zheng
Sheng, Huakang
Shen, Xiaolin
Sun, Xinxiao
Zhang, Yifei
Yan, Yajun
Wang, Jia
Yuan, Qipeng
author_facet Ge, Chang
Yu, Zheng
Sheng, Huakang
Shen, Xiaolin
Sun, Xinxiao
Zhang, Yifei
Yan, Yajun
Wang, Jia
Yuan, Qipeng
author_sort Ge, Chang
collection PubMed
description Quorum sensing (QS) is a ubiquitous cell–cell communication mechanism that can be employed to autonomously and dynamically control metabolic fluxes. However, since the functions of genetic components in the circuits are not fully understood, the developed QS circuits are still less sophisticated for regulating multiple sets of genes or operons in metabolic engineering applications. Here, we discover the regulatory roles of a CRP-binding site and the lux box to −10 region within luxR-luxI intergenic sequence in controlling the lux-type QS promoters. By varying the numbers of the CRP-binding site and redesigning the lux box to −10 site sequence, we create a library of QS variants that possess both high dynamic ranges and low leakiness. These circuits are successfully applied to achieve diverse metabolic control in salicylic acid and 4-hydroxycoumarin biosynthetic pathways in Escherichia coli. This work expands the toolbox for dynamic control of multiple metabolic fluxes under complex metabolic background and presents paradigms to engineer metabolic pathways for high-level synthesis of target products.
format Online
Article
Text
id pubmed-9023504
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-90235042022-04-28 Redesigning regulatory components of quorum-sensing system for diverse metabolic control Ge, Chang Yu, Zheng Sheng, Huakang Shen, Xiaolin Sun, Xinxiao Zhang, Yifei Yan, Yajun Wang, Jia Yuan, Qipeng Nat Commun Article Quorum sensing (QS) is a ubiquitous cell–cell communication mechanism that can be employed to autonomously and dynamically control metabolic fluxes. However, since the functions of genetic components in the circuits are not fully understood, the developed QS circuits are still less sophisticated for regulating multiple sets of genes or operons in metabolic engineering applications. Here, we discover the regulatory roles of a CRP-binding site and the lux box to −10 region within luxR-luxI intergenic sequence in controlling the lux-type QS promoters. By varying the numbers of the CRP-binding site and redesigning the lux box to −10 site sequence, we create a library of QS variants that possess both high dynamic ranges and low leakiness. These circuits are successfully applied to achieve diverse metabolic control in salicylic acid and 4-hydroxycoumarin biosynthetic pathways in Escherichia coli. This work expands the toolbox for dynamic control of multiple metabolic fluxes under complex metabolic background and presents paradigms to engineer metabolic pathways for high-level synthesis of target products. Nature Publishing Group UK 2022-04-21 /pmc/articles/PMC9023504/ /pubmed/35449138 http://dx.doi.org/10.1038/s41467-022-29933-x Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ge, Chang
Yu, Zheng
Sheng, Huakang
Shen, Xiaolin
Sun, Xinxiao
Zhang, Yifei
Yan, Yajun
Wang, Jia
Yuan, Qipeng
Redesigning regulatory components of quorum-sensing system for diverse metabolic control
title Redesigning regulatory components of quorum-sensing system for diverse metabolic control
title_full Redesigning regulatory components of quorum-sensing system for diverse metabolic control
title_fullStr Redesigning regulatory components of quorum-sensing system for diverse metabolic control
title_full_unstemmed Redesigning regulatory components of quorum-sensing system for diverse metabolic control
title_short Redesigning regulatory components of quorum-sensing system for diverse metabolic control
title_sort redesigning regulatory components of quorum-sensing system for diverse metabolic control
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9023504/
https://www.ncbi.nlm.nih.gov/pubmed/35449138
http://dx.doi.org/10.1038/s41467-022-29933-x
work_keys_str_mv AT gechang redesigningregulatorycomponentsofquorumsensingsystemfordiversemetaboliccontrol
AT yuzheng redesigningregulatorycomponentsofquorumsensingsystemfordiversemetaboliccontrol
AT shenghuakang redesigningregulatorycomponentsofquorumsensingsystemfordiversemetaboliccontrol
AT shenxiaolin redesigningregulatorycomponentsofquorumsensingsystemfordiversemetaboliccontrol
AT sunxinxiao redesigningregulatorycomponentsofquorumsensingsystemfordiversemetaboliccontrol
AT zhangyifei redesigningregulatorycomponentsofquorumsensingsystemfordiversemetaboliccontrol
AT yanyajun redesigningregulatorycomponentsofquorumsensingsystemfordiversemetaboliccontrol
AT wangjia redesigningregulatorycomponentsofquorumsensingsystemfordiversemetaboliccontrol
AT yuanqipeng redesigningregulatorycomponentsofquorumsensingsystemfordiversemetaboliccontrol