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Meta-analysis of the robustness of COVID-19 diagnostic kit performance during the early pandemic

BACKGROUND: Accurate detection of SARS-CoV-2 is necessary to mitigate the COVID-19 pandemic. However, the test reagents and assay platforms are varied and may not be sufficiently robust to diagnose COVID-19. METHODS: We reviewed 85 studies (21 530 patients), published from five regions of the world,...

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Autores principales: Shanmugam, Chandrakumar, Behring, Michael, Luthra, Vishwas, Leal, Sixto M, Varambally, Sooryanarayana, Netto, George J, Manne, Upender
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9023849/
https://www.ncbi.nlm.nih.gov/pubmed/35450897
http://dx.doi.org/10.1136/bmjopen-2021-053912
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author Shanmugam, Chandrakumar
Behring, Michael
Luthra, Vishwas
Leal, Sixto M
Varambally, Sooryanarayana
Netto, George J
Manne, Upender
author_facet Shanmugam, Chandrakumar
Behring, Michael
Luthra, Vishwas
Leal, Sixto M
Varambally, Sooryanarayana
Netto, George J
Manne, Upender
author_sort Shanmugam, Chandrakumar
collection PubMed
description BACKGROUND: Accurate detection of SARS-CoV-2 is necessary to mitigate the COVID-19 pandemic. However, the test reagents and assay platforms are varied and may not be sufficiently robust to diagnose COVID-19. METHODS: We reviewed 85 studies (21 530 patients), published from five regions of the world, to highlight issues involved in the diagnosis of COVID-19 in the early phase of the pandemic. All relevant articles, published up to 31 May 2020, in PubMed, BioRiXv, MedRiXv and Google Scholar, were included. We evaluated the qualitative (9749 patients) and quantitative (10 355 patients) performance of RT-PCR and serologic diagnostic tests for real-world samples, and assessed the concordance (5538 patients) between test performance in meta-analyses. Synthesis of results was done using random effects modelling and bias was evaluated according to QUADAS-2 guidelines. RESULTS: The RT-PCR tests exhibited heterogeneity in the primers and reagents used. Of 1957 positive RT-PCR COVID-19 participants, 1585 had positive serum antibody (IgM±IgG) tests (sensitivity 0.81, 95% CI 0.66 to 0.90). While 3509 of 3581 participants RT-PCR negative for COVID-19 were found negative by serology testing (specificity 0.98, 95% CI 0.94 to 0.99). The chemiluminescent immunoassay exhibited the highest sensitivity, followed by ELISA and lateral flow immunoassays. Serology tests had higher sensitivity and specificity for laboratory approval than for real-world reporting data. DISCUSSION: The robustness of the assays/platforms is influenced by variability in sampling and reagents. Serological testing complements and may minimise false negative RT-PCR results. Lack of standardised assay protocols in the early phase of pandemic might have contributed to the spread of COVID-19.
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spelling pubmed-90238492022-04-22 Meta-analysis of the robustness of COVID-19 diagnostic kit performance during the early pandemic Shanmugam, Chandrakumar Behring, Michael Luthra, Vishwas Leal, Sixto M Varambally, Sooryanarayana Netto, George J Manne, Upender BMJ Open Infectious Diseases BACKGROUND: Accurate detection of SARS-CoV-2 is necessary to mitigate the COVID-19 pandemic. However, the test reagents and assay platforms are varied and may not be sufficiently robust to diagnose COVID-19. METHODS: We reviewed 85 studies (21 530 patients), published from five regions of the world, to highlight issues involved in the diagnosis of COVID-19 in the early phase of the pandemic. All relevant articles, published up to 31 May 2020, in PubMed, BioRiXv, MedRiXv and Google Scholar, were included. We evaluated the qualitative (9749 patients) and quantitative (10 355 patients) performance of RT-PCR and serologic diagnostic tests for real-world samples, and assessed the concordance (5538 patients) between test performance in meta-analyses. Synthesis of results was done using random effects modelling and bias was evaluated according to QUADAS-2 guidelines. RESULTS: The RT-PCR tests exhibited heterogeneity in the primers and reagents used. Of 1957 positive RT-PCR COVID-19 participants, 1585 had positive serum antibody (IgM±IgG) tests (sensitivity 0.81, 95% CI 0.66 to 0.90). While 3509 of 3581 participants RT-PCR negative for COVID-19 were found negative by serology testing (specificity 0.98, 95% CI 0.94 to 0.99). The chemiluminescent immunoassay exhibited the highest sensitivity, followed by ELISA and lateral flow immunoassays. Serology tests had higher sensitivity and specificity for laboratory approval than for real-world reporting data. DISCUSSION: The robustness of the assays/platforms is influenced by variability in sampling and reagents. Serological testing complements and may minimise false negative RT-PCR results. Lack of standardised assay protocols in the early phase of pandemic might have contributed to the spread of COVID-19. BMJ Publishing Group 2022-04-21 /pmc/articles/PMC9023849/ /pubmed/35450897 http://dx.doi.org/10.1136/bmjopen-2021-053912 Text en © Author(s) (or their employer(s)) 2022. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited, appropriate credit is given, any changes made indicated, and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) .
spellingShingle Infectious Diseases
Shanmugam, Chandrakumar
Behring, Michael
Luthra, Vishwas
Leal, Sixto M
Varambally, Sooryanarayana
Netto, George J
Manne, Upender
Meta-analysis of the robustness of COVID-19 diagnostic kit performance during the early pandemic
title Meta-analysis of the robustness of COVID-19 diagnostic kit performance during the early pandemic
title_full Meta-analysis of the robustness of COVID-19 diagnostic kit performance during the early pandemic
title_fullStr Meta-analysis of the robustness of COVID-19 diagnostic kit performance during the early pandemic
title_full_unstemmed Meta-analysis of the robustness of COVID-19 diagnostic kit performance during the early pandemic
title_short Meta-analysis of the robustness of COVID-19 diagnostic kit performance during the early pandemic
title_sort meta-analysis of the robustness of covid-19 diagnostic kit performance during the early pandemic
topic Infectious Diseases
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9023849/
https://www.ncbi.nlm.nih.gov/pubmed/35450897
http://dx.doi.org/10.1136/bmjopen-2021-053912
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