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Predictive Models for Weekly Cattle Mortality after Arrival at a Feeding Location Using Records, Weather, and Transport Data at Time of Purchase

Feedlot mortality negatively affects animal welfare and profitability. To the best of our knowledge, there are no publications on predictive models for weekly all-cause mortality in feedlot cattle. In this study, random forest models to predict weekly mortality for cattle purchase groups (n = 14,217...

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Autores principales: Wisnieski, Lauren, Amrine, David E., Renter, David G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9024862/
https://www.ncbi.nlm.nih.gov/pubmed/35456148
http://dx.doi.org/10.3390/pathogens11040473
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author Wisnieski, Lauren
Amrine, David E.
Renter, David G.
author_facet Wisnieski, Lauren
Amrine, David E.
Renter, David G.
author_sort Wisnieski, Lauren
collection PubMed
description Feedlot mortality negatively affects animal welfare and profitability. To the best of our knowledge, there are no publications on predictive models for weekly all-cause mortality in feedlot cattle. In this study, random forest models to predict weekly mortality for cattle purchase groups (n = 14,217 purchase groups; 860,545 animals) from arrival at the feeding location (Day 1) to Day 42 and cumulative mortality from Day 43 until slaughter were built using records, weather, and transport data available at the time of purchase. Models were evaluated by calculating the root mean squared error (RMSE) and accuracy (as defined as the percent of purchase groups that had predictions within 0.25% and 0.50% of actual mortality). The models had high accuracy (>90%), but the RMSE estimates were high (range = 1.0% to 4.1%). The best predictors were maximum temperature and purchase weight, although this varied by week. The models performed well among purchase groups with low weekly mortality but performed poorly in high mortality purchase groups. Although high mortality purchase groups were not accurately predicted utilizing the models in this study, the models may potentially have utility as a screening tool for very low mortality purchase groups after arrival. Future studies should consider building iterative models that utilize the strongest predictors identified in this study.
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spelling pubmed-90248622022-04-23 Predictive Models for Weekly Cattle Mortality after Arrival at a Feeding Location Using Records, Weather, and Transport Data at Time of Purchase Wisnieski, Lauren Amrine, David E. Renter, David G. Pathogens Article Feedlot mortality negatively affects animal welfare and profitability. To the best of our knowledge, there are no publications on predictive models for weekly all-cause mortality in feedlot cattle. In this study, random forest models to predict weekly mortality for cattle purchase groups (n = 14,217 purchase groups; 860,545 animals) from arrival at the feeding location (Day 1) to Day 42 and cumulative mortality from Day 43 until slaughter were built using records, weather, and transport data available at the time of purchase. Models were evaluated by calculating the root mean squared error (RMSE) and accuracy (as defined as the percent of purchase groups that had predictions within 0.25% and 0.50% of actual mortality). The models had high accuracy (>90%), but the RMSE estimates were high (range = 1.0% to 4.1%). The best predictors were maximum temperature and purchase weight, although this varied by week. The models performed well among purchase groups with low weekly mortality but performed poorly in high mortality purchase groups. Although high mortality purchase groups were not accurately predicted utilizing the models in this study, the models may potentially have utility as a screening tool for very low mortality purchase groups after arrival. Future studies should consider building iterative models that utilize the strongest predictors identified in this study. MDPI 2022-04-15 /pmc/articles/PMC9024862/ /pubmed/35456148 http://dx.doi.org/10.3390/pathogens11040473 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wisnieski, Lauren
Amrine, David E.
Renter, David G.
Predictive Models for Weekly Cattle Mortality after Arrival at a Feeding Location Using Records, Weather, and Transport Data at Time of Purchase
title Predictive Models for Weekly Cattle Mortality after Arrival at a Feeding Location Using Records, Weather, and Transport Data at Time of Purchase
title_full Predictive Models for Weekly Cattle Mortality after Arrival at a Feeding Location Using Records, Weather, and Transport Data at Time of Purchase
title_fullStr Predictive Models for Weekly Cattle Mortality after Arrival at a Feeding Location Using Records, Weather, and Transport Data at Time of Purchase
title_full_unstemmed Predictive Models for Weekly Cattle Mortality after Arrival at a Feeding Location Using Records, Weather, and Transport Data at Time of Purchase
title_short Predictive Models for Weekly Cattle Mortality after Arrival at a Feeding Location Using Records, Weather, and Transport Data at Time of Purchase
title_sort predictive models for weekly cattle mortality after arrival at a feeding location using records, weather, and transport data at time of purchase
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9024862/
https://www.ncbi.nlm.nih.gov/pubmed/35456148
http://dx.doi.org/10.3390/pathogens11040473
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