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Rolling Circle Amplification-based Copper Nanoparticle Synthesis on Cyclic Olefin Copolymer Substrate and Its Application in Aptasensor

This study aimed to develop a label-free fluorescent aptasensor for the detection of diazinon (DZN) on a cyclic olefin copolymer (COC) substrate. The aptasensor design was based on rolling circle amplification (RCA) technology and the use of self-assembled copper nanoparticles (CuNPs). A dual-functi...

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Autores principales: Kim, Tai-Yong, Lim, Min-Cheol, Lim, Ji Won, Woo, Min-Ah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society for Biotechnology and Bioengineering 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9026004/
https://www.ncbi.nlm.nih.gov/pubmed/35474695
http://dx.doi.org/10.1007/s12257-021-0220-0
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author Kim, Tai-Yong
Lim, Min-Cheol
Lim, Ji Won
Woo, Min-Ah
author_facet Kim, Tai-Yong
Lim, Min-Cheol
Lim, Ji Won
Woo, Min-Ah
author_sort Kim, Tai-Yong
collection PubMed
description This study aimed to develop a label-free fluorescent aptasensor for the detection of diazinon (DZN) on a cyclic olefin copolymer (COC) substrate. The aptasensor design was based on rolling circle amplification (RCA) technology and the use of self-assembled copper nanoparticles (CuNPs). A dual-function (DF) probe, capable of binding to circular DNA and an aptamer, was designed and immobilized on a COC-bottom 96-well plate. An aptamer was used for selective recognition of DZN, and the specific site of the aptamer that strongly reacted with DZN was successfully identified using circular dichroism (CD) analysis. In presence of DZN, the aptamer and DZN formed a strong complex, thus providing an opportunity for hybridization of the DF probe and circular DNA, thereby initiating an RCA reaction. Repetitive poly thymine (T) sequence with a length of 30-mer, generated in the RCA reaction, served as a template for the synthesis of fluorescent copper nanoparticles, emitting an orange fluorescence signal (at approximately 620 nm) proportional to the amount of RCA product, within 10 min under UV irradiation. The CuNP fluorescence was imaged and quantified using an image analysis software. A linear correlation of the fluorescence signal was confirmed in the DZN concentration range of 0.1–3 ppm, with a detection limit of 0.15 ppm. Adoption of a label-free detection method, utilizing RCA and fluorescent CuNPs on COC substrates, reduced the need for complex equipment and requirements for DZN analysis, thereby representing a simple and rapid sensing method circumventing the limitations of current complex and labor-intensive methods. ELECTRONIC SUPPLEMENTARY MATERIAL (ESM): The online version of this article (doi:10.1007/s12257-021-0220-0) contains supplementary material, which is available to authorized users.
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spelling pubmed-90260042022-04-22 Rolling Circle Amplification-based Copper Nanoparticle Synthesis on Cyclic Olefin Copolymer Substrate and Its Application in Aptasensor Kim, Tai-Yong Lim, Min-Cheol Lim, Ji Won Woo, Min-Ah Biotechnol Bioprocess Eng Research Paper This study aimed to develop a label-free fluorescent aptasensor for the detection of diazinon (DZN) on a cyclic olefin copolymer (COC) substrate. The aptasensor design was based on rolling circle amplification (RCA) technology and the use of self-assembled copper nanoparticles (CuNPs). A dual-function (DF) probe, capable of binding to circular DNA and an aptamer, was designed and immobilized on a COC-bottom 96-well plate. An aptamer was used for selective recognition of DZN, and the specific site of the aptamer that strongly reacted with DZN was successfully identified using circular dichroism (CD) analysis. In presence of DZN, the aptamer and DZN formed a strong complex, thus providing an opportunity for hybridization of the DF probe and circular DNA, thereby initiating an RCA reaction. Repetitive poly thymine (T) sequence with a length of 30-mer, generated in the RCA reaction, served as a template for the synthesis of fluorescent copper nanoparticles, emitting an orange fluorescence signal (at approximately 620 nm) proportional to the amount of RCA product, within 10 min under UV irradiation. The CuNP fluorescence was imaged and quantified using an image analysis software. A linear correlation of the fluorescence signal was confirmed in the DZN concentration range of 0.1–3 ppm, with a detection limit of 0.15 ppm. Adoption of a label-free detection method, utilizing RCA and fluorescent CuNPs on COC substrates, reduced the need for complex equipment and requirements for DZN analysis, thereby representing a simple and rapid sensing method circumventing the limitations of current complex and labor-intensive methods. ELECTRONIC SUPPLEMENTARY MATERIAL (ESM): The online version of this article (doi:10.1007/s12257-021-0220-0) contains supplementary material, which is available to authorized users. The Korean Society for Biotechnology and Bioengineering 2022-04-22 2022 /pmc/articles/PMC9026004/ /pubmed/35474695 http://dx.doi.org/10.1007/s12257-021-0220-0 Text en © The Korean Society for Biotechnology and Bioengineering and Springer 2022 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Research Paper
Kim, Tai-Yong
Lim, Min-Cheol
Lim, Ji Won
Woo, Min-Ah
Rolling Circle Amplification-based Copper Nanoparticle Synthesis on Cyclic Olefin Copolymer Substrate and Its Application in Aptasensor
title Rolling Circle Amplification-based Copper Nanoparticle Synthesis on Cyclic Olefin Copolymer Substrate and Its Application in Aptasensor
title_full Rolling Circle Amplification-based Copper Nanoparticle Synthesis on Cyclic Olefin Copolymer Substrate and Its Application in Aptasensor
title_fullStr Rolling Circle Amplification-based Copper Nanoparticle Synthesis on Cyclic Olefin Copolymer Substrate and Its Application in Aptasensor
title_full_unstemmed Rolling Circle Amplification-based Copper Nanoparticle Synthesis on Cyclic Olefin Copolymer Substrate and Its Application in Aptasensor
title_short Rolling Circle Amplification-based Copper Nanoparticle Synthesis on Cyclic Olefin Copolymer Substrate and Its Application in Aptasensor
title_sort rolling circle amplification-based copper nanoparticle synthesis on cyclic olefin copolymer substrate and its application in aptasensor
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9026004/
https://www.ncbi.nlm.nih.gov/pubmed/35474695
http://dx.doi.org/10.1007/s12257-021-0220-0
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