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Prioritization of Candidate Biomarkers for Degenerative Aortic Stenosis through a Systems Biology-Based In-Silico Approach

Degenerative aortic stenosis is the most common valve disease in the elderly and is usually confirmed at an advanced stage when the only treatment is surgery. This work is focused on the study of previously defined biomarkers through systems biology and artificial neuronal networks to understand the...

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Autores principales: Corbacho-Alonso, Nerea, Sastre-Oliva, Tamara, Corros, Cecilia, Tejerina, Teresa, Solis, Jorge, López-Almodovar, Luis F., Padial, Luis R., Mourino-Alvarez, Laura, Barderas, Maria G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9026876/
https://www.ncbi.nlm.nih.gov/pubmed/35455758
http://dx.doi.org/10.3390/jpm12040642
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author Corbacho-Alonso, Nerea
Sastre-Oliva, Tamara
Corros, Cecilia
Tejerina, Teresa
Solis, Jorge
López-Almodovar, Luis F.
Padial, Luis R.
Mourino-Alvarez, Laura
Barderas, Maria G.
author_facet Corbacho-Alonso, Nerea
Sastre-Oliva, Tamara
Corros, Cecilia
Tejerina, Teresa
Solis, Jorge
López-Almodovar, Luis F.
Padial, Luis R.
Mourino-Alvarez, Laura
Barderas, Maria G.
author_sort Corbacho-Alonso, Nerea
collection PubMed
description Degenerative aortic stenosis is the most common valve disease in the elderly and is usually confirmed at an advanced stage when the only treatment is surgery. This work is focused on the study of previously defined biomarkers through systems biology and artificial neuronal networks to understand their potential role within aortic stenosis. The goal was generating a molecular panel of biomarkers to ensure an accurate diagnosis, risk stratification, and follow-up of aortic stenosis patients. We used in silico studies to combine and re-analyze the results of our previous studies and, with information from multiple databases, established a mathematical model. After this, we prioritized two proteins related to endoplasmic reticulum stress, thrombospondin-1 and endoplasmin, which have not been previously validated as markers for aortic stenosis, and analyzed them in a cell model and in plasma from human subjects. Large-scale bioinformatics tools allow us to extract the most significant results after using high throughput analytical techniques. Our results could help to prevent the development of aortic stenosis and open the possibility of a future strategy based on more specific therapies.
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spelling pubmed-90268762022-04-23 Prioritization of Candidate Biomarkers for Degenerative Aortic Stenosis through a Systems Biology-Based In-Silico Approach Corbacho-Alonso, Nerea Sastre-Oliva, Tamara Corros, Cecilia Tejerina, Teresa Solis, Jorge López-Almodovar, Luis F. Padial, Luis R. Mourino-Alvarez, Laura Barderas, Maria G. J Pers Med Article Degenerative aortic stenosis is the most common valve disease in the elderly and is usually confirmed at an advanced stage when the only treatment is surgery. This work is focused on the study of previously defined biomarkers through systems biology and artificial neuronal networks to understand their potential role within aortic stenosis. The goal was generating a molecular panel of biomarkers to ensure an accurate diagnosis, risk stratification, and follow-up of aortic stenosis patients. We used in silico studies to combine and re-analyze the results of our previous studies and, with information from multiple databases, established a mathematical model. After this, we prioritized two proteins related to endoplasmic reticulum stress, thrombospondin-1 and endoplasmin, which have not been previously validated as markers for aortic stenosis, and analyzed them in a cell model and in plasma from human subjects. Large-scale bioinformatics tools allow us to extract the most significant results after using high throughput analytical techniques. Our results could help to prevent the development of aortic stenosis and open the possibility of a future strategy based on more specific therapies. MDPI 2022-04-15 /pmc/articles/PMC9026876/ /pubmed/35455758 http://dx.doi.org/10.3390/jpm12040642 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Corbacho-Alonso, Nerea
Sastre-Oliva, Tamara
Corros, Cecilia
Tejerina, Teresa
Solis, Jorge
López-Almodovar, Luis F.
Padial, Luis R.
Mourino-Alvarez, Laura
Barderas, Maria G.
Prioritization of Candidate Biomarkers for Degenerative Aortic Stenosis through a Systems Biology-Based In-Silico Approach
title Prioritization of Candidate Biomarkers for Degenerative Aortic Stenosis through a Systems Biology-Based In-Silico Approach
title_full Prioritization of Candidate Biomarkers for Degenerative Aortic Stenosis through a Systems Biology-Based In-Silico Approach
title_fullStr Prioritization of Candidate Biomarkers for Degenerative Aortic Stenosis through a Systems Biology-Based In-Silico Approach
title_full_unstemmed Prioritization of Candidate Biomarkers for Degenerative Aortic Stenosis through a Systems Biology-Based In-Silico Approach
title_short Prioritization of Candidate Biomarkers for Degenerative Aortic Stenosis through a Systems Biology-Based In-Silico Approach
title_sort prioritization of candidate biomarkers for degenerative aortic stenosis through a systems biology-based in-silico approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9026876/
https://www.ncbi.nlm.nih.gov/pubmed/35455758
http://dx.doi.org/10.3390/jpm12040642
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