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The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review
Classic Hodgkin lymphoma (cHL) constitutes a B cell-derived neoplasm defined by a scarce tumoral population, termed Hodgkin and Reed–Sternberg (HRS) cells, submerged into a histologically heterogeneous microenvironment. The paucity of HRS cells has historically hampered genetic studies, rendering th...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9027849/ https://www.ncbi.nlm.nih.gov/pubmed/35454013 http://dx.doi.org/10.3390/diagnostics12040963 |
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author | Santisteban-Espejo, Antonio Bernal-Florindo, Irene Perez-Requena, Jose Atienza-Cuevas, Lidia Moran-Sanchez, Julia Fernandez-Valle, María del Carmen Romero-Garcia, Raquel Garcia-Rojo, Marcial |
author_facet | Santisteban-Espejo, Antonio Bernal-Florindo, Irene Perez-Requena, Jose Atienza-Cuevas, Lidia Moran-Sanchez, Julia Fernandez-Valle, María del Carmen Romero-Garcia, Raquel Garcia-Rojo, Marcial |
author_sort | Santisteban-Espejo, Antonio |
collection | PubMed |
description | Classic Hodgkin lymphoma (cHL) constitutes a B cell-derived neoplasm defined by a scarce tumoral population, termed Hodgkin and Reed–Sternberg (HRS) cells, submerged into a histologically heterogeneous microenvironment. The paucity of HRS cells has historically hampered genetic studies, rendering the identification of the recurrent genetic lesions and molecular pathways deregulated in this lymphoma difficult. The advent of high-throughput sequencing methods such as next-generation sequencing (NGS) could sensibly optimize the identification of the mutational landscape of cHL. However, there is no current consensus either in the design of panels for targeted NGS or in its most relevant clinical applications. In this work, we systematically review the current state of NGS studies of cHL, stressing the need for standardization both in the candidate genes to be analyzed and the bioinformatic pipelines. As different institutions have developed and implemented their own customized NGS-based protocols, to compare and systematically review the major findings of this ongoing research area could be of added value for centers that routinely perform diagnostic, monitoring and genotyping strategies in cHL samples. The results of this systematic review should contribute to the interdepartmental harmonization and achievement of a consensus in the current clinical applications of NGS studies of cHL. |
format | Online Article Text |
id | pubmed-9027849 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-90278492022-04-23 The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review Santisteban-Espejo, Antonio Bernal-Florindo, Irene Perez-Requena, Jose Atienza-Cuevas, Lidia Moran-Sanchez, Julia Fernandez-Valle, María del Carmen Romero-Garcia, Raquel Garcia-Rojo, Marcial Diagnostics (Basel) Systematic Review Classic Hodgkin lymphoma (cHL) constitutes a B cell-derived neoplasm defined by a scarce tumoral population, termed Hodgkin and Reed–Sternberg (HRS) cells, submerged into a histologically heterogeneous microenvironment. The paucity of HRS cells has historically hampered genetic studies, rendering the identification of the recurrent genetic lesions and molecular pathways deregulated in this lymphoma difficult. The advent of high-throughput sequencing methods such as next-generation sequencing (NGS) could sensibly optimize the identification of the mutational landscape of cHL. However, there is no current consensus either in the design of panels for targeted NGS or in its most relevant clinical applications. In this work, we systematically review the current state of NGS studies of cHL, stressing the need for standardization both in the candidate genes to be analyzed and the bioinformatic pipelines. As different institutions have developed and implemented their own customized NGS-based protocols, to compare and systematically review the major findings of this ongoing research area could be of added value for centers that routinely perform diagnostic, monitoring and genotyping strategies in cHL samples. The results of this systematic review should contribute to the interdepartmental harmonization and achievement of a consensus in the current clinical applications of NGS studies of cHL. MDPI 2022-04-12 /pmc/articles/PMC9027849/ /pubmed/35454013 http://dx.doi.org/10.3390/diagnostics12040963 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Systematic Review Santisteban-Espejo, Antonio Bernal-Florindo, Irene Perez-Requena, Jose Atienza-Cuevas, Lidia Moran-Sanchez, Julia Fernandez-Valle, María del Carmen Romero-Garcia, Raquel Garcia-Rojo, Marcial The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review |
title | The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review |
title_full | The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review |
title_fullStr | The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review |
title_full_unstemmed | The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review |
title_short | The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review |
title_sort | need for standardization in next-generation sequencing studies for classic hodgkin lymphoma: a systematic review |
topic | Systematic Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9027849/ https://www.ncbi.nlm.nih.gov/pubmed/35454013 http://dx.doi.org/10.3390/diagnostics12040963 |
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