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The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review

Classic Hodgkin lymphoma (cHL) constitutes a B cell-derived neoplasm defined by a scarce tumoral population, termed Hodgkin and Reed–Sternberg (HRS) cells, submerged into a histologically heterogeneous microenvironment. The paucity of HRS cells has historically hampered genetic studies, rendering th...

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Autores principales: Santisteban-Espejo, Antonio, Bernal-Florindo, Irene, Perez-Requena, Jose, Atienza-Cuevas, Lidia, Moran-Sanchez, Julia, Fernandez-Valle, María del Carmen, Romero-Garcia, Raquel, Garcia-Rojo, Marcial
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9027849/
https://www.ncbi.nlm.nih.gov/pubmed/35454013
http://dx.doi.org/10.3390/diagnostics12040963
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author Santisteban-Espejo, Antonio
Bernal-Florindo, Irene
Perez-Requena, Jose
Atienza-Cuevas, Lidia
Moran-Sanchez, Julia
Fernandez-Valle, María del Carmen
Romero-Garcia, Raquel
Garcia-Rojo, Marcial
author_facet Santisteban-Espejo, Antonio
Bernal-Florindo, Irene
Perez-Requena, Jose
Atienza-Cuevas, Lidia
Moran-Sanchez, Julia
Fernandez-Valle, María del Carmen
Romero-Garcia, Raquel
Garcia-Rojo, Marcial
author_sort Santisteban-Espejo, Antonio
collection PubMed
description Classic Hodgkin lymphoma (cHL) constitutes a B cell-derived neoplasm defined by a scarce tumoral population, termed Hodgkin and Reed–Sternberg (HRS) cells, submerged into a histologically heterogeneous microenvironment. The paucity of HRS cells has historically hampered genetic studies, rendering the identification of the recurrent genetic lesions and molecular pathways deregulated in this lymphoma difficult. The advent of high-throughput sequencing methods such as next-generation sequencing (NGS) could sensibly optimize the identification of the mutational landscape of cHL. However, there is no current consensus either in the design of panels for targeted NGS or in its most relevant clinical applications. In this work, we systematically review the current state of NGS studies of cHL, stressing the need for standardization both in the candidate genes to be analyzed and the bioinformatic pipelines. As different institutions have developed and implemented their own customized NGS-based protocols, to compare and systematically review the major findings of this ongoing research area could be of added value for centers that routinely perform diagnostic, monitoring and genotyping strategies in cHL samples. The results of this systematic review should contribute to the interdepartmental harmonization and achievement of a consensus in the current clinical applications of NGS studies of cHL.
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spelling pubmed-90278492022-04-23 The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review Santisteban-Espejo, Antonio Bernal-Florindo, Irene Perez-Requena, Jose Atienza-Cuevas, Lidia Moran-Sanchez, Julia Fernandez-Valle, María del Carmen Romero-Garcia, Raquel Garcia-Rojo, Marcial Diagnostics (Basel) Systematic Review Classic Hodgkin lymphoma (cHL) constitutes a B cell-derived neoplasm defined by a scarce tumoral population, termed Hodgkin and Reed–Sternberg (HRS) cells, submerged into a histologically heterogeneous microenvironment. The paucity of HRS cells has historically hampered genetic studies, rendering the identification of the recurrent genetic lesions and molecular pathways deregulated in this lymphoma difficult. The advent of high-throughput sequencing methods such as next-generation sequencing (NGS) could sensibly optimize the identification of the mutational landscape of cHL. However, there is no current consensus either in the design of panels for targeted NGS or in its most relevant clinical applications. In this work, we systematically review the current state of NGS studies of cHL, stressing the need for standardization both in the candidate genes to be analyzed and the bioinformatic pipelines. As different institutions have developed and implemented their own customized NGS-based protocols, to compare and systematically review the major findings of this ongoing research area could be of added value for centers that routinely perform diagnostic, monitoring and genotyping strategies in cHL samples. The results of this systematic review should contribute to the interdepartmental harmonization and achievement of a consensus in the current clinical applications of NGS studies of cHL. MDPI 2022-04-12 /pmc/articles/PMC9027849/ /pubmed/35454013 http://dx.doi.org/10.3390/diagnostics12040963 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Systematic Review
Santisteban-Espejo, Antonio
Bernal-Florindo, Irene
Perez-Requena, Jose
Atienza-Cuevas, Lidia
Moran-Sanchez, Julia
Fernandez-Valle, María del Carmen
Romero-Garcia, Raquel
Garcia-Rojo, Marcial
The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review
title The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review
title_full The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review
title_fullStr The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review
title_full_unstemmed The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review
title_short The Need for Standardization in Next-Generation Sequencing Studies for Classic Hodgkin Lymphoma: A Systematic Review
title_sort need for standardization in next-generation sequencing studies for classic hodgkin lymphoma: a systematic review
topic Systematic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9027849/
https://www.ncbi.nlm.nih.gov/pubmed/35454013
http://dx.doi.org/10.3390/diagnostics12040963
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