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Deep learning for spirometry quality assurance with spirometric indices and curves

BACKGROUND: Spirometry quality assurance is a challenging task across levels of healthcare tiers, especially in primary care. Deep learning may serve as a support tool for enhancing spirometry quality. We aimed to develop a high accuracy and sensitive deep learning-based model aiming at assisting hi...

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Autores principales: Wang, Yimin, Li, Yicong, Chen, Wenya, Zhang, Changzheng, Liang, Lijuan, Huang, Ruibo, Liang, Jianling, Tu, Dandan, Gao, Yi, Zheng, Jinping, Zhong, Nanshan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9028127/
https://www.ncbi.nlm.nih.gov/pubmed/35448995
http://dx.doi.org/10.1186/s12931-022-02014-9
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author Wang, Yimin
Li, Yicong
Chen, Wenya
Zhang, Changzheng
Liang, Lijuan
Huang, Ruibo
Liang, Jianling
Tu, Dandan
Gao, Yi
Zheng, Jinping
Zhong, Nanshan
author_facet Wang, Yimin
Li, Yicong
Chen, Wenya
Zhang, Changzheng
Liang, Lijuan
Huang, Ruibo
Liang, Jianling
Tu, Dandan
Gao, Yi
Zheng, Jinping
Zhong, Nanshan
author_sort Wang, Yimin
collection PubMed
description BACKGROUND: Spirometry quality assurance is a challenging task across levels of healthcare tiers, especially in primary care. Deep learning may serve as a support tool for enhancing spirometry quality. We aimed to develop a high accuracy and sensitive deep learning-based model aiming at assisting high-quality spirometry assurance. METHODS: Spirometry PDF files retrieved from one hospital between October 2017 and October 2020 were labeled according to ATS/ERS 2019 criteria and divided into training and internal test sets. Additional files from three hospitals were used for external testing. A deep learning-based model was constructed and assessed to determine acceptability, usability, and quality rating for FEV(1) and FVC. System warning messages and patient instructions were also generated for general practitioners (GPs). RESULTS: A total of 16,502 files were labeled. Of these, 4592 curves were assigned to the internal test set, the remaining constituted the training set. In the internal test set, the model generated 95.1%, 92.4%, and 94.3% accuracy for FEV(1) acceptability, usability, and rating. The accuracy for FVC acceptability, usability, and rating were 93.6%, 94.3%, and 92.2%. With the assistance of the model, the performance of GPs in terms of monthly percentages of good quality (A, B, or C grades) tests for FEV(1) and FVC was higher by ~ 21% and ~ 36%, respectively. CONCLUSION: The proposed model assisted GPs in spirometry quality assurance, resulting in enhancing the performance of GPs in quality control of spirometry. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12931-022-02014-9.
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spelling pubmed-90281272022-04-23 Deep learning for spirometry quality assurance with spirometric indices and curves Wang, Yimin Li, Yicong Chen, Wenya Zhang, Changzheng Liang, Lijuan Huang, Ruibo Liang, Jianling Tu, Dandan Gao, Yi Zheng, Jinping Zhong, Nanshan Respir Res Research BACKGROUND: Spirometry quality assurance is a challenging task across levels of healthcare tiers, especially in primary care. Deep learning may serve as a support tool for enhancing spirometry quality. We aimed to develop a high accuracy and sensitive deep learning-based model aiming at assisting high-quality spirometry assurance. METHODS: Spirometry PDF files retrieved from one hospital between October 2017 and October 2020 were labeled according to ATS/ERS 2019 criteria and divided into training and internal test sets. Additional files from three hospitals were used for external testing. A deep learning-based model was constructed and assessed to determine acceptability, usability, and quality rating for FEV(1) and FVC. System warning messages and patient instructions were also generated for general practitioners (GPs). RESULTS: A total of 16,502 files were labeled. Of these, 4592 curves were assigned to the internal test set, the remaining constituted the training set. In the internal test set, the model generated 95.1%, 92.4%, and 94.3% accuracy for FEV(1) acceptability, usability, and rating. The accuracy for FVC acceptability, usability, and rating were 93.6%, 94.3%, and 92.2%. With the assistance of the model, the performance of GPs in terms of monthly percentages of good quality (A, B, or C grades) tests for FEV(1) and FVC was higher by ~ 21% and ~ 36%, respectively. CONCLUSION: The proposed model assisted GPs in spirometry quality assurance, resulting in enhancing the performance of GPs in quality control of spirometry. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12931-022-02014-9. BioMed Central 2022-04-21 2022 /pmc/articles/PMC9028127/ /pubmed/35448995 http://dx.doi.org/10.1186/s12931-022-02014-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Wang, Yimin
Li, Yicong
Chen, Wenya
Zhang, Changzheng
Liang, Lijuan
Huang, Ruibo
Liang, Jianling
Tu, Dandan
Gao, Yi
Zheng, Jinping
Zhong, Nanshan
Deep learning for spirometry quality assurance with spirometric indices and curves
title Deep learning for spirometry quality assurance with spirometric indices and curves
title_full Deep learning for spirometry quality assurance with spirometric indices and curves
title_fullStr Deep learning for spirometry quality assurance with spirometric indices and curves
title_full_unstemmed Deep learning for spirometry quality assurance with spirometric indices and curves
title_short Deep learning for spirometry quality assurance with spirometric indices and curves
title_sort deep learning for spirometry quality assurance with spirometric indices and curves
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9028127/
https://www.ncbi.nlm.nih.gov/pubmed/35448995
http://dx.doi.org/10.1186/s12931-022-02014-9
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