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Snake Venomics: Fundamentals, Recent Updates, and a Look to the Next Decade

Venomic research, powered by techniques adapted from proteomics, transcriptomics, and genomics, seeks to unravel the diversity and complexity of venom through which knowledge can be applied in the treatment of envenoming, biodiscovery, and conservation. Snake venom proteomics is most extensively stu...

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Autor principal: Tan, Choo Hock
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9028316/
https://www.ncbi.nlm.nih.gov/pubmed/35448856
http://dx.doi.org/10.3390/toxins14040247
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author Tan, Choo Hock
author_facet Tan, Choo Hock
author_sort Tan, Choo Hock
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description Venomic research, powered by techniques adapted from proteomics, transcriptomics, and genomics, seeks to unravel the diversity and complexity of venom through which knowledge can be applied in the treatment of envenoming, biodiscovery, and conservation. Snake venom proteomics is most extensively studied, but the methods varied widely, creating a massive amount of information which complicates data comparison and interpretation. Advancement in mass spectrometry technology, accompanied by growing databases and sophisticated bioinformatic tools, has overcome earlier limitations of protein identification. The progress, however, remains challenged by limited accessibility to samples, non-standardized quantitative methods, and biased interpretation of -omic data. Next-generation sequencing (NGS) technologies enable high-throughput venom-gland transcriptomics and genomics, complementing venom proteomics by providing deeper insights into the structural diversity, differential expression, regulation and functional interaction of the toxin genes. Venomic tissue sampling is, however, difficult due to strict regulations on wildlife use and transfer of biological materials in some countries. Limited resources for techniques and funding are among other pertinent issues that impede the progress of venomics, particularly in less developed regions and for neglected species. Genuine collaboration between international researchers, due recognition of regional experts by global organizations (e.g., WHO), and improved distribution of research support, should be embraced.
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spelling pubmed-90283162022-04-23 Snake Venomics: Fundamentals, Recent Updates, and a Look to the Next Decade Tan, Choo Hock Toxins (Basel) Review Venomic research, powered by techniques adapted from proteomics, transcriptomics, and genomics, seeks to unravel the diversity and complexity of venom through which knowledge can be applied in the treatment of envenoming, biodiscovery, and conservation. Snake venom proteomics is most extensively studied, but the methods varied widely, creating a massive amount of information which complicates data comparison and interpretation. Advancement in mass spectrometry technology, accompanied by growing databases and sophisticated bioinformatic tools, has overcome earlier limitations of protein identification. The progress, however, remains challenged by limited accessibility to samples, non-standardized quantitative methods, and biased interpretation of -omic data. Next-generation sequencing (NGS) technologies enable high-throughput venom-gland transcriptomics and genomics, complementing venom proteomics by providing deeper insights into the structural diversity, differential expression, regulation and functional interaction of the toxin genes. Venomic tissue sampling is, however, difficult due to strict regulations on wildlife use and transfer of biological materials in some countries. Limited resources for techniques and funding are among other pertinent issues that impede the progress of venomics, particularly in less developed regions and for neglected species. Genuine collaboration between international researchers, due recognition of regional experts by global organizations (e.g., WHO), and improved distribution of research support, should be embraced. MDPI 2022-03-30 /pmc/articles/PMC9028316/ /pubmed/35448856 http://dx.doi.org/10.3390/toxins14040247 Text en © 2022 by the author. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Tan, Choo Hock
Snake Venomics: Fundamentals, Recent Updates, and a Look to the Next Decade
title Snake Venomics: Fundamentals, Recent Updates, and a Look to the Next Decade
title_full Snake Venomics: Fundamentals, Recent Updates, and a Look to the Next Decade
title_fullStr Snake Venomics: Fundamentals, Recent Updates, and a Look to the Next Decade
title_full_unstemmed Snake Venomics: Fundamentals, Recent Updates, and a Look to the Next Decade
title_short Snake Venomics: Fundamentals, Recent Updates, and a Look to the Next Decade
title_sort snake venomics: fundamentals, recent updates, and a look to the next decade
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9028316/
https://www.ncbi.nlm.nih.gov/pubmed/35448856
http://dx.doi.org/10.3390/toxins14040247
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