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DLK2 Acts as a Potential Prognostic Biomarker for Clear Cell Renal Cell Carcinoma Based on Bioinformatics Analysis
Clear cell renal cell carcinoma (ccRCC) is the most common RCC subtype with a high mortality. It has been reported that delta-like 1 homologue (DLK1) participates in the tumor microenvironmental remodeling of ccRCC, but the relationship between delta-like 2 homologue (DLK2, a DLK1 homologue) and ccR...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9030291/ https://www.ncbi.nlm.nih.gov/pubmed/35456435 http://dx.doi.org/10.3390/genes13040629 |
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author | Lee, Man-Gang Lee, Yung-Kuo Huang, Shih-Chung Chang, Chen-Lin Ko, Chou-Yuan Lee, Wen-Chin Chen, Tung-Yuan Tzou, Shiow-Jyu Huang, Cheng-Yi Tai, Ming-Hong Lin, Yu-Wei Kung, Mei-Lang Tsai, Ming-Chao Chen, Yung-Lung Chang, Yi-Chen Wen, Zhi-Hong Huang, Chao-Cheng Chu, Tian-Huei |
author_facet | Lee, Man-Gang Lee, Yung-Kuo Huang, Shih-Chung Chang, Chen-Lin Ko, Chou-Yuan Lee, Wen-Chin Chen, Tung-Yuan Tzou, Shiow-Jyu Huang, Cheng-Yi Tai, Ming-Hong Lin, Yu-Wei Kung, Mei-Lang Tsai, Ming-Chao Chen, Yung-Lung Chang, Yi-Chen Wen, Zhi-Hong Huang, Chao-Cheng Chu, Tian-Huei |
author_sort | Lee, Man-Gang |
collection | PubMed |
description | Clear cell renal cell carcinoma (ccRCC) is the most common RCC subtype with a high mortality. It has been reported that delta-like 1 homologue (DLK1) participates in the tumor microenvironmental remodeling of ccRCC, but the relationship between delta-like 2 homologue (DLK2, a DLK1 homologue) and ccRCC is still unclear. Thus, this study aims to investigate the role of DLK2 in the biological function and disease prognosis of ccRCC using bioinformatics analysis. The TNMplot database showed that DLK2 was upregulated in ccRCC tissues. From the UALCAN analysis, the overexpression of DLK2 was associated with advanced stage and high grade in ccRCC. Moreover, the Kaplan-Meier plotter (KM Plotter) database showed that DLK2 upregulation was associated with poor survival outcome in ccRCC. By the LinkedOmics analysis, DLK2 signaling may participated in the modulation of ccRCC extracellular matrix (ECM), cell metabolism, ribosome biogenesis, TGF-β signaling and Notch pathway. Besides, Tumor Immune Estimation Resource (TIMER) analysis showed that the macrophage and CD8(+) T cell infiltrations were associated with good prognosis in ccRCC patients. Finally, DLK2 overexpression was associated with the reduced macrophage recruitments and the M1–M2 polarization of macrophage in ccRCC tissues. Together, DLK2 may acts as a novel biomarker, even therapeutic target in ccRCC. However, this study lacks experimental validation, and further studies are required to support this viewpoint. |
format | Online Article Text |
id | pubmed-9030291 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-90302912022-04-23 DLK2 Acts as a Potential Prognostic Biomarker for Clear Cell Renal Cell Carcinoma Based on Bioinformatics Analysis Lee, Man-Gang Lee, Yung-Kuo Huang, Shih-Chung Chang, Chen-Lin Ko, Chou-Yuan Lee, Wen-Chin Chen, Tung-Yuan Tzou, Shiow-Jyu Huang, Cheng-Yi Tai, Ming-Hong Lin, Yu-Wei Kung, Mei-Lang Tsai, Ming-Chao Chen, Yung-Lung Chang, Yi-Chen Wen, Zhi-Hong Huang, Chao-Cheng Chu, Tian-Huei Genes (Basel) Article Clear cell renal cell carcinoma (ccRCC) is the most common RCC subtype with a high mortality. It has been reported that delta-like 1 homologue (DLK1) participates in the tumor microenvironmental remodeling of ccRCC, but the relationship between delta-like 2 homologue (DLK2, a DLK1 homologue) and ccRCC is still unclear. Thus, this study aims to investigate the role of DLK2 in the biological function and disease prognosis of ccRCC using bioinformatics analysis. The TNMplot database showed that DLK2 was upregulated in ccRCC tissues. From the UALCAN analysis, the overexpression of DLK2 was associated with advanced stage and high grade in ccRCC. Moreover, the Kaplan-Meier plotter (KM Plotter) database showed that DLK2 upregulation was associated with poor survival outcome in ccRCC. By the LinkedOmics analysis, DLK2 signaling may participated in the modulation of ccRCC extracellular matrix (ECM), cell metabolism, ribosome biogenesis, TGF-β signaling and Notch pathway. Besides, Tumor Immune Estimation Resource (TIMER) analysis showed that the macrophage and CD8(+) T cell infiltrations were associated with good prognosis in ccRCC patients. Finally, DLK2 overexpression was associated with the reduced macrophage recruitments and the M1–M2 polarization of macrophage in ccRCC tissues. Together, DLK2 may acts as a novel biomarker, even therapeutic target in ccRCC. However, this study lacks experimental validation, and further studies are required to support this viewpoint. MDPI 2022-04-01 /pmc/articles/PMC9030291/ /pubmed/35456435 http://dx.doi.org/10.3390/genes13040629 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Lee, Man-Gang Lee, Yung-Kuo Huang, Shih-Chung Chang, Chen-Lin Ko, Chou-Yuan Lee, Wen-Chin Chen, Tung-Yuan Tzou, Shiow-Jyu Huang, Cheng-Yi Tai, Ming-Hong Lin, Yu-Wei Kung, Mei-Lang Tsai, Ming-Chao Chen, Yung-Lung Chang, Yi-Chen Wen, Zhi-Hong Huang, Chao-Cheng Chu, Tian-Huei DLK2 Acts as a Potential Prognostic Biomarker for Clear Cell Renal Cell Carcinoma Based on Bioinformatics Analysis |
title | DLK2 Acts as a Potential Prognostic Biomarker for Clear Cell Renal Cell Carcinoma Based on Bioinformatics Analysis |
title_full | DLK2 Acts as a Potential Prognostic Biomarker for Clear Cell Renal Cell Carcinoma Based on Bioinformatics Analysis |
title_fullStr | DLK2 Acts as a Potential Prognostic Biomarker for Clear Cell Renal Cell Carcinoma Based on Bioinformatics Analysis |
title_full_unstemmed | DLK2 Acts as a Potential Prognostic Biomarker for Clear Cell Renal Cell Carcinoma Based on Bioinformatics Analysis |
title_short | DLK2 Acts as a Potential Prognostic Biomarker for Clear Cell Renal Cell Carcinoma Based on Bioinformatics Analysis |
title_sort | dlk2 acts as a potential prognostic biomarker for clear cell renal cell carcinoma based on bioinformatics analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9030291/ https://www.ncbi.nlm.nih.gov/pubmed/35456435 http://dx.doi.org/10.3390/genes13040629 |
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