Cargando…
lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD
Despite rapidly evolving pathobiological mechanistic demystification, coupled with advances in diagnostic and therapeutic modalities, chronic obstructive pulmonary disease (COPD) remains a major healthcare and clinical challenge, globally. Further compounded by the dearth of available curative anti-...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9031132/ https://www.ncbi.nlm.nih.gov/pubmed/35453536 http://dx.doi.org/10.3390/biomedicines10040786 |
_version_ | 1784692313983811584 |
---|---|
author | Bamodu, Oluwaseun Adebayo Wu, Sheng-Ming Feng, Po-Hao Sun, Wei-Lun Lin, Cheng-Wei Chuang, Hsiao-Chi Ho, Shu-Chuan Chen, Kuan-Yuan Chen, Tzu-Tao Tseng, Chien-Hua Liu, Wen-Te Lee, Kang-Yun |
author_facet | Bamodu, Oluwaseun Adebayo Wu, Sheng-Ming Feng, Po-Hao Sun, Wei-Lun Lin, Cheng-Wei Chuang, Hsiao-Chi Ho, Shu-Chuan Chen, Kuan-Yuan Chen, Tzu-Tao Tseng, Chien-Hua Liu, Wen-Te Lee, Kang-Yun |
author_sort | Bamodu, Oluwaseun Adebayo |
collection | PubMed |
description | Despite rapidly evolving pathobiological mechanistic demystification, coupled with advances in diagnostic and therapeutic modalities, chronic obstructive pulmonary disease (COPD) remains a major healthcare and clinical challenge, globally. Further compounded by the dearth of available curative anti-COPD therapy, it is posited that this challenge may not be dissociated from the current lack of actionable COPD pathognomonic molecular biomarkers. There is accruing evidence of the involvement of protracted ‘smoldering’ inflammation, repeated lung injury, and accelerated lung aging in enhanced predisposition to or progression of COPD. The relatively novel uncharacterized human long noncoding RNA lnc-IL7R (otherwise called LOC100506406) is increasingly designated a negative modulator of inflammation and regulator of cellular stress responses; however, its role in pulmonary physiology and COPD pathogenesis remains largely unclear and underexplored. Our previous work suggested that upregulated lnc-IL7R expression attenuates inflammation following the activation of the toll-like receptor (TLR)-dependent innate immune system, and that the upregulated lnc-IL7R is anti-correlated with concomitant high PM(2.5), PM(10), and SO(2) levels, which is pathognomonic for exacerbated/aggravated COPD in Taiwan. In the present study, our quantitative analysis of lnc-IL7R expression in our COPD cohort (n = 125) showed that the lnc-IL7R level was significantly correlated with physiological pulmonary function and exhibited COPD-based stratification implications (area under the curve, AUC = 0.86, p < 0.001). We found that the lnc-IL7R level correctly identified patients with COPD (sensitivity = 0.83, specificity = 0.83), precisely discriminated those without emphysematous phenotype (sensitivity = 0.48, specificity = 0.89), and its differential expression reflected disease course based on its correlation with the COPD GOLD stage (r = −0.59, p < 0.001), %LAA(-950insp) (r = −0.30, p = 0.002), total LAA (r = −0.35, p < 0.001), FEV(1)(%) (r = 0.52, p < 0.001), FVC (%) (r = 0.45, p < 0.001), and post-bronchodilator FEV(1)/FVC (r = 0.41, p < 0.001). Consistent with other data, our bioinformatics-aided dose–response plot showed that the probability of COPD decreased as lnc-IL7R expression increased, thus, corroborating our posited anti-COPD therapeutic potential of lnc-IL7R. In conclusion, reduced lnc-IL7R expression not only is associated with inflammation in the airway epithelial cells but is indicative of impaired pulmonary function, pathognomonic of COPD, and predictive of an exacerbated/ aggravated COPD phenotype. These data provide new mechanistic insights into the ailing lung and COPD progression, as well as suggest a novel actionable molecular factor that may be exploited as an efficacious therapeutic strategy in patients with COPD. |
format | Online Article Text |
id | pubmed-9031132 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-90311322022-04-23 lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD Bamodu, Oluwaseun Adebayo Wu, Sheng-Ming Feng, Po-Hao Sun, Wei-Lun Lin, Cheng-Wei Chuang, Hsiao-Chi Ho, Shu-Chuan Chen, Kuan-Yuan Chen, Tzu-Tao Tseng, Chien-Hua Liu, Wen-Te Lee, Kang-Yun Biomedicines Communication Despite rapidly evolving pathobiological mechanistic demystification, coupled with advances in diagnostic and therapeutic modalities, chronic obstructive pulmonary disease (COPD) remains a major healthcare and clinical challenge, globally. Further compounded by the dearth of available curative anti-COPD therapy, it is posited that this challenge may not be dissociated from the current lack of actionable COPD pathognomonic molecular biomarkers. There is accruing evidence of the involvement of protracted ‘smoldering’ inflammation, repeated lung injury, and accelerated lung aging in enhanced predisposition to or progression of COPD. The relatively novel uncharacterized human long noncoding RNA lnc-IL7R (otherwise called LOC100506406) is increasingly designated a negative modulator of inflammation and regulator of cellular stress responses; however, its role in pulmonary physiology and COPD pathogenesis remains largely unclear and underexplored. Our previous work suggested that upregulated lnc-IL7R expression attenuates inflammation following the activation of the toll-like receptor (TLR)-dependent innate immune system, and that the upregulated lnc-IL7R is anti-correlated with concomitant high PM(2.5), PM(10), and SO(2) levels, which is pathognomonic for exacerbated/aggravated COPD in Taiwan. In the present study, our quantitative analysis of lnc-IL7R expression in our COPD cohort (n = 125) showed that the lnc-IL7R level was significantly correlated with physiological pulmonary function and exhibited COPD-based stratification implications (area under the curve, AUC = 0.86, p < 0.001). We found that the lnc-IL7R level correctly identified patients with COPD (sensitivity = 0.83, specificity = 0.83), precisely discriminated those without emphysematous phenotype (sensitivity = 0.48, specificity = 0.89), and its differential expression reflected disease course based on its correlation with the COPD GOLD stage (r = −0.59, p < 0.001), %LAA(-950insp) (r = −0.30, p = 0.002), total LAA (r = −0.35, p < 0.001), FEV(1)(%) (r = 0.52, p < 0.001), FVC (%) (r = 0.45, p < 0.001), and post-bronchodilator FEV(1)/FVC (r = 0.41, p < 0.001). Consistent with other data, our bioinformatics-aided dose–response plot showed that the probability of COPD decreased as lnc-IL7R expression increased, thus, corroborating our posited anti-COPD therapeutic potential of lnc-IL7R. In conclusion, reduced lnc-IL7R expression not only is associated with inflammation in the airway epithelial cells but is indicative of impaired pulmonary function, pathognomonic of COPD, and predictive of an exacerbated/ aggravated COPD phenotype. These data provide new mechanistic insights into the ailing lung and COPD progression, as well as suggest a novel actionable molecular factor that may be exploited as an efficacious therapeutic strategy in patients with COPD. MDPI 2022-03-28 /pmc/articles/PMC9031132/ /pubmed/35453536 http://dx.doi.org/10.3390/biomedicines10040786 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Communication Bamodu, Oluwaseun Adebayo Wu, Sheng-Ming Feng, Po-Hao Sun, Wei-Lun Lin, Cheng-Wei Chuang, Hsiao-Chi Ho, Shu-Chuan Chen, Kuan-Yuan Chen, Tzu-Tao Tseng, Chien-Hua Liu, Wen-Te Lee, Kang-Yun lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD |
title | lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD |
title_full | lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD |
title_fullStr | lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD |
title_full_unstemmed | lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD |
title_short | lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD |
title_sort | lnc-il7r expression reflects physiological pulmonary function and its aberration is a putative indicator of copd |
topic | Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9031132/ https://www.ncbi.nlm.nih.gov/pubmed/35453536 http://dx.doi.org/10.3390/biomedicines10040786 |
work_keys_str_mv | AT bamoduoluwaseunadebayo lncil7rexpressionreflectsphysiologicalpulmonaryfunctionanditsaberrationisaputativeindicatorofcopd AT wushengming lncil7rexpressionreflectsphysiologicalpulmonaryfunctionanditsaberrationisaputativeindicatorofcopd AT fengpohao lncil7rexpressionreflectsphysiologicalpulmonaryfunctionanditsaberrationisaputativeindicatorofcopd AT sunweilun lncil7rexpressionreflectsphysiologicalpulmonaryfunctionanditsaberrationisaputativeindicatorofcopd AT linchengwei lncil7rexpressionreflectsphysiologicalpulmonaryfunctionanditsaberrationisaputativeindicatorofcopd AT chuanghsiaochi lncil7rexpressionreflectsphysiologicalpulmonaryfunctionanditsaberrationisaputativeindicatorofcopd AT hoshuchuan lncil7rexpressionreflectsphysiologicalpulmonaryfunctionanditsaberrationisaputativeindicatorofcopd AT chenkuanyuan lncil7rexpressionreflectsphysiologicalpulmonaryfunctionanditsaberrationisaputativeindicatorofcopd AT chentzutao lncil7rexpressionreflectsphysiologicalpulmonaryfunctionanditsaberrationisaputativeindicatorofcopd AT tsengchienhua lncil7rexpressionreflectsphysiologicalpulmonaryfunctionanditsaberrationisaputativeindicatorofcopd AT liuwente lncil7rexpressionreflectsphysiologicalpulmonaryfunctionanditsaberrationisaputativeindicatorofcopd AT leekangyun lncil7rexpressionreflectsphysiologicalpulmonaryfunctionanditsaberrationisaputativeindicatorofcopd |