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lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD

Despite rapidly evolving pathobiological mechanistic demystification, coupled with advances in diagnostic and therapeutic modalities, chronic obstructive pulmonary disease (COPD) remains a major healthcare and clinical challenge, globally. Further compounded by the dearth of available curative anti-...

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Autores principales: Bamodu, Oluwaseun Adebayo, Wu, Sheng-Ming, Feng, Po-Hao, Sun, Wei-Lun, Lin, Cheng-Wei, Chuang, Hsiao-Chi, Ho, Shu-Chuan, Chen, Kuan-Yuan, Chen, Tzu-Tao, Tseng, Chien-Hua, Liu, Wen-Te, Lee, Kang-Yun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9031132/
https://www.ncbi.nlm.nih.gov/pubmed/35453536
http://dx.doi.org/10.3390/biomedicines10040786
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author Bamodu, Oluwaseun Adebayo
Wu, Sheng-Ming
Feng, Po-Hao
Sun, Wei-Lun
Lin, Cheng-Wei
Chuang, Hsiao-Chi
Ho, Shu-Chuan
Chen, Kuan-Yuan
Chen, Tzu-Tao
Tseng, Chien-Hua
Liu, Wen-Te
Lee, Kang-Yun
author_facet Bamodu, Oluwaseun Adebayo
Wu, Sheng-Ming
Feng, Po-Hao
Sun, Wei-Lun
Lin, Cheng-Wei
Chuang, Hsiao-Chi
Ho, Shu-Chuan
Chen, Kuan-Yuan
Chen, Tzu-Tao
Tseng, Chien-Hua
Liu, Wen-Te
Lee, Kang-Yun
author_sort Bamodu, Oluwaseun Adebayo
collection PubMed
description Despite rapidly evolving pathobiological mechanistic demystification, coupled with advances in diagnostic and therapeutic modalities, chronic obstructive pulmonary disease (COPD) remains a major healthcare and clinical challenge, globally. Further compounded by the dearth of available curative anti-COPD therapy, it is posited that this challenge may not be dissociated from the current lack of actionable COPD pathognomonic molecular biomarkers. There is accruing evidence of the involvement of protracted ‘smoldering’ inflammation, repeated lung injury, and accelerated lung aging in enhanced predisposition to or progression of COPD. The relatively novel uncharacterized human long noncoding RNA lnc-IL7R (otherwise called LOC100506406) is increasingly designated a negative modulator of inflammation and regulator of cellular stress responses; however, its role in pulmonary physiology and COPD pathogenesis remains largely unclear and underexplored. Our previous work suggested that upregulated lnc-IL7R expression attenuates inflammation following the activation of the toll-like receptor (TLR)-dependent innate immune system, and that the upregulated lnc-IL7R is anti-correlated with concomitant high PM(2.5), PM(10), and SO(2) levels, which is pathognomonic for exacerbated/aggravated COPD in Taiwan. In the present study, our quantitative analysis of lnc-IL7R expression in our COPD cohort (n = 125) showed that the lnc-IL7R level was significantly correlated with physiological pulmonary function and exhibited COPD-based stratification implications (area under the curve, AUC = 0.86, p < 0.001). We found that the lnc-IL7R level correctly identified patients with COPD (sensitivity = 0.83, specificity = 0.83), precisely discriminated those without emphysematous phenotype (sensitivity = 0.48, specificity = 0.89), and its differential expression reflected disease course based on its correlation with the COPD GOLD stage (r = −0.59, p < 0.001), %LAA(-950insp) (r = −0.30, p = 0.002), total LAA (r = −0.35, p < 0.001), FEV(1)(%) (r = 0.52, p < 0.001), FVC (%) (r = 0.45, p < 0.001), and post-bronchodilator FEV(1)/FVC (r = 0.41, p < 0.001). Consistent with other data, our bioinformatics-aided dose–response plot showed that the probability of COPD decreased as lnc-IL7R expression increased, thus, corroborating our posited anti-COPD therapeutic potential of lnc-IL7R. In conclusion, reduced lnc-IL7R expression not only is associated with inflammation in the airway epithelial cells but is indicative of impaired pulmonary function, pathognomonic of COPD, and predictive of an exacerbated/ aggravated COPD phenotype. These data provide new mechanistic insights into the ailing lung and COPD progression, as well as suggest a novel actionable molecular factor that may be exploited as an efficacious therapeutic strategy in patients with COPD.
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spelling pubmed-90311322022-04-23 lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD Bamodu, Oluwaseun Adebayo Wu, Sheng-Ming Feng, Po-Hao Sun, Wei-Lun Lin, Cheng-Wei Chuang, Hsiao-Chi Ho, Shu-Chuan Chen, Kuan-Yuan Chen, Tzu-Tao Tseng, Chien-Hua Liu, Wen-Te Lee, Kang-Yun Biomedicines Communication Despite rapidly evolving pathobiological mechanistic demystification, coupled with advances in diagnostic and therapeutic modalities, chronic obstructive pulmonary disease (COPD) remains a major healthcare and clinical challenge, globally. Further compounded by the dearth of available curative anti-COPD therapy, it is posited that this challenge may not be dissociated from the current lack of actionable COPD pathognomonic molecular biomarkers. There is accruing evidence of the involvement of protracted ‘smoldering’ inflammation, repeated lung injury, and accelerated lung aging in enhanced predisposition to or progression of COPD. The relatively novel uncharacterized human long noncoding RNA lnc-IL7R (otherwise called LOC100506406) is increasingly designated a negative modulator of inflammation and regulator of cellular stress responses; however, its role in pulmonary physiology and COPD pathogenesis remains largely unclear and underexplored. Our previous work suggested that upregulated lnc-IL7R expression attenuates inflammation following the activation of the toll-like receptor (TLR)-dependent innate immune system, and that the upregulated lnc-IL7R is anti-correlated with concomitant high PM(2.5), PM(10), and SO(2) levels, which is pathognomonic for exacerbated/aggravated COPD in Taiwan. In the present study, our quantitative analysis of lnc-IL7R expression in our COPD cohort (n = 125) showed that the lnc-IL7R level was significantly correlated with physiological pulmonary function and exhibited COPD-based stratification implications (area under the curve, AUC = 0.86, p < 0.001). We found that the lnc-IL7R level correctly identified patients with COPD (sensitivity = 0.83, specificity = 0.83), precisely discriminated those without emphysematous phenotype (sensitivity = 0.48, specificity = 0.89), and its differential expression reflected disease course based on its correlation with the COPD GOLD stage (r = −0.59, p < 0.001), %LAA(-950insp) (r = −0.30, p = 0.002), total LAA (r = −0.35, p < 0.001), FEV(1)(%) (r = 0.52, p < 0.001), FVC (%) (r = 0.45, p < 0.001), and post-bronchodilator FEV(1)/FVC (r = 0.41, p < 0.001). Consistent with other data, our bioinformatics-aided dose–response plot showed that the probability of COPD decreased as lnc-IL7R expression increased, thus, corroborating our posited anti-COPD therapeutic potential of lnc-IL7R. In conclusion, reduced lnc-IL7R expression not only is associated with inflammation in the airway epithelial cells but is indicative of impaired pulmonary function, pathognomonic of COPD, and predictive of an exacerbated/ aggravated COPD phenotype. These data provide new mechanistic insights into the ailing lung and COPD progression, as well as suggest a novel actionable molecular factor that may be exploited as an efficacious therapeutic strategy in patients with COPD. MDPI 2022-03-28 /pmc/articles/PMC9031132/ /pubmed/35453536 http://dx.doi.org/10.3390/biomedicines10040786 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Bamodu, Oluwaseun Adebayo
Wu, Sheng-Ming
Feng, Po-Hao
Sun, Wei-Lun
Lin, Cheng-Wei
Chuang, Hsiao-Chi
Ho, Shu-Chuan
Chen, Kuan-Yuan
Chen, Tzu-Tao
Tseng, Chien-Hua
Liu, Wen-Te
Lee, Kang-Yun
lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD
title lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD
title_full lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD
title_fullStr lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD
title_full_unstemmed lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD
title_short lnc-IL7R Expression Reflects Physiological Pulmonary Function and Its Aberration Is a Putative Indicator of COPD
title_sort lnc-il7r expression reflects physiological pulmonary function and its aberration is a putative indicator of copd
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9031132/
https://www.ncbi.nlm.nih.gov/pubmed/35453536
http://dx.doi.org/10.3390/biomedicines10040786
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