Cargando…

Reactive Acrylamide-Modified DNA Traps for Accurate Cross-Linking with Cysteine Residues in DNA–Protein Complexes Using Mismatch Repair Protein MutS as a Model

Covalent protein capture (cross-linking) by reactive DNA derivatives makes it possible to investigate structural features by fixing complexes at different stages of DNA–protein recognition. The most common cross-linking methods are based on reactive groups that interact with native or engineered cys...

Descripción completa

Detalles Bibliográficos
Autores principales:	Monakhova, Mayya V., Kubareva, Elena A., Kolesnikov, Kirill K., Anashkin, Viktor A., Kosaretskiy, Egor M., Zvereva, Maria I., Romanova, Elena A., Friedhoff, Peter, Oretskaya, Tatiana S., Zatsepin, Timofei S.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9031232/ https://www.ncbi.nlm.nih.gov/pubmed/35458636 http://dx.doi.org/10.3390/molecules27082438

Ejemplares similares

Modern Aspects of the Structural and Functional Organization of the DNA Mismatch Repair System
por: Perevoztchikova, S. A., et al.
Publicado: (2013)

Is Thymidine Glycol Containing DNA a Substrate of E. coli DNA Mismatch Repair System?
por: Perevozchikova, Svetlana A., et al.
Publicado: (2014)

New DNA Plasmid Model for Studying DNA Mismatch Repair Response to the G4 Structure
por: Pavlova, Anzhela V., et al.
Publicado: (2023)

Responses of DNA Mismatch Repair Proteins to a Stable G-Quadruplex Embedded into a DNA Duplex Structure
por: Pavlova, Anzhela V., et al.
Publicado: (2020)

G-Quadruplex Formed by the Promoter Region of the hTERT Gene: Structure-Driven Effects on DNA Mismatch Repair Functions
por: Pavlova, Anzhela V., et al.
Publicado: (2022)

Impact of G-Quadruplexes on the Regulation of Genome Integrity, DNA Damage and Repair
por: Pavlova, Anzhela V., et al.
Publicado: (2021)

pilE G-Quadruplex Is Recognized and Preferentially Bound but Not Processed by the MutL Endonuclease from Neisseria gonorrhoeae Mismatch Repair Pathway
por: Savitskaya, Viktoriia Yu., et al.
Publicado: (2023)

Native mass spectrometry provides direct evidence for DNA mismatch-induced regulation of asymmetric nucleotide binding in mismatch repair protein MutS
por: Monti, Maria Chiara, et al.
Publicado: (2011)

Single-molecule multiparameter fluorescence spectroscopy reveals directional MutS binding to mismatched bases in DNA
por: Cristóvão, Michele, et al.
Publicado: (2012)

Coordinated protein and DNA conformational changes govern mismatch repair initiation by MutS
por: LeBlanc, Sharonda J, et al.
Publicado: (2018)

Mutations in the MutSα interaction interface of MLH1 can abolish DNA mismatch repair
por: Plotz, Guido, et al.
Publicado: (2006)

MutS/MutL crystal structure reveals that the MutS sliding clamp loads MutL onto DNA
por: Groothuizen, Flora S, et al.
Publicado: (2015)

Using stable MutS dimers and tetramers to quantitatively analyze DNA mismatch recognition and sliding clamp formation
por: Groothuizen, Flora S., et al.
Publicado: (2013)

Magnesium Coordination Controls the Molecular Switch Function of DNA Mismatch Repair Protein MutS
por: Lebbink, Joyce H. G., et al.
Publicado: (2010)

Dynamics of MutS–Mismatched DNA Complexes Are Predictive of Their Repair Phenotypes
por: DeRocco, Vanessa C., et al.
Publicado: (2014)

Glycosylation of Receptor Binding Domain of SARS-CoV-2 S-Protein Influences on Binding to Immobilized DNA Aptamers
por: Grabovenko, Fedor, et al.
Publicado: (2022)

MutS functions as a clamp loader by positioning MutL on the DNA during mismatch repair
por: Yang, Xiao-Wen, et al.
Publicado: (2022)

Impact of G-Quadruplex Structures on Methylation of Model Substrates by DNA Methyltransferase Dnmt3a
por: Loiko, Andrei G., et al.
Publicado: (2022)

Electrochemical detection of mismatched DNA using a MutS probe
por: Cho, Minseon, et al.
Publicado: (2006)

Mispair-bound human MutS–MutL complex triggers DNA incisions and activates mismatch repair
por: Ortega, Janice, et al.
Publicado: (2021)

Kinetic Basis of the Bifunctionality of SsoII DNA Methyltransferase
por: Timofeyeva, Nadezhda A., et al.
Publicado: (2018)

Site- and strand-specific nicking of DNA by fusion proteins derived from MutH and I-SceI or TALE repeats
por: Gabsalilow, Lilia, et al.
Publicado: (2013)

Mechanistic comparison of Bacillus subtilis 6S-1 and 6S-2 RNAs—commonalities and differences
por: Burenina, Olga Y., et al.
Publicado: (2014)

Characterisation of the MutS and MutL Proteins from the Pseudomonas avellanae Mismatch Repair (MMR) System
por: Grenga, Lucia, et al.
Publicado: (2012)

The unstructured linker arms of MutL enable GATC site incision beyond roadblocks during initiation of DNA mismatch repair
por: Mardenborough, Yannicka S N, et al.
Publicado: (2019)

A study on endonuclease BspD6I and its stimulus-responsive switching by modified oligonucleotides
por: Abrosimova, Liudmila A., et al.
Publicado: (2018)

Genome-wide contributions of the MutSα- and MutSβ-dependent DNA mismatch repair pathways to the maintenance of genetic stability in Saccharomyces cerevisiae
por: Kadyrova, Lyudmila Y., et al.
Publicado: (2023)

Evolutionary Covariance Combined with Molecular Dynamics Predicts a Framework for Allostery in the MutS DNA Mismatch Repair Protein
por: Lakhani, Bharat, et al.
Publicado: (2017)

Coarse-grained molecular dynamics simulations of base-pair mismatch recognition protein MutS sliding along DNA
por: Inoue, Keisuke, et al.
Publicado: (2022)

Interactions of Human Mismatch Repair Proteins MutSα and MutLα with Proteins of the ATR-Chk1 Pathway
por: Liu, Yiyong, et al.
Publicado: (2010)

Both hMutSα and hMutSß DNA Mismatch Repair Complexes Participate in 5-Fluorouracil Cytotoxicity
por: Tajima, Akihiro, et al.
Publicado: (2011)

8-Oxoguanine incorporation into DNA repeats in vitro and mismatch recognition by MutSα
por: Macpherson, Peter, et al.
Publicado: (2005)

8-Oxoguanine incorporation into DNA repeats in vitro and mismatch recognition by MutSα
por: Macpherson, Peter, et al.
Publicado: (2005)

Exploiting the distinctive properties of the bacterial and human MutS homolog sliding clamps on mismatched DNA
por: Britton, Brooke M., et al.
Publicado: (2022)

PCNA–MutSα-mediated binding of MutLα to replicative DNA with mismatched bases to induce apoptosis in human cells
por: Hidaka, Masumi, et al.
Publicado: (2005)

Mechanism of mismatch recognition revealed by human MutSβ bound to unpaired DNA loops
por: Gupta, Shikha, et al.
Publicado: (2011)

The mismatch repair system (mutS and mutL) in Acinetobacter baylyi ADP1
por: Zhou, Hua, et al.
Publicado: (2020)

The UvrD helicase and its modulation by the mismatch repair protein MutL
por: Matson, Steven W., et al.
Publicado: (2006)

The mismatch repair endonuclease MutLα tethers duplex regions of DNA together and relieves DNA torsional tension
por: Witte, Scott J, et al.
Publicado: (2023)

Kinetic Analysis of the Interaction of Nicking Endonuclease BspD6I with DNA
por: Abrosimova, Liudmila A., et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_0bsjs69fpivq9dbsjt06toukhs