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Zika virus lateral flow assays using reverse transcription-loop-mediated isothermal amplification

Owing to the global spread of the Zika virus (ZIKV) infection, field-ready diagnostics are urgently warranted. In this study, we sought to detect ZIKV using reverse transcription loop-mediated isothermal amplification (RT-LAMP). Briefly, we performed and optimized ZIKV RT-LAMP for the analysis of bi...

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Autores principales: Ahn, Gna, Lee, SeonHyung, Lee, Se Hee, Baek, Yun Hee, Song, Min-Suk, Kim, Yang-Hoon, Ahn, Ji-Young
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9033246/
https://www.ncbi.nlm.nih.gov/pubmed/35480212
http://dx.doi.org/10.1039/d1ra01227d
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author Ahn, Gna
Lee, SeonHyung
Lee, Se Hee
Baek, Yun Hee
Song, Min-Suk
Kim, Yang-Hoon
Ahn, Ji-Young
author_facet Ahn, Gna
Lee, SeonHyung
Lee, Se Hee
Baek, Yun Hee
Song, Min-Suk
Kim, Yang-Hoon
Ahn, Ji-Young
author_sort Ahn, Gna
collection PubMed
description Owing to the global spread of the Zika virus (ZIKV) infection, field-ready diagnostics are urgently warranted. In this study, we sought to detect ZIKV using reverse transcription loop-mediated isothermal amplification (RT-LAMP). Briefly, we performed and optimized ZIKV RT-LAMP for the analysis of biological samples (PBS, urine, and plasma). Based on our findings, this method could detect ZIKV RNA in 40 min at 63 °C without any off-target amplification. After performing specificity tests using BtsI restriction enzyme digestion, the feasibility of ZIKV RT-LAMP was determined via end-point detection with different sample matrices. Thereafter, a lateral flow assay (LFA) was conducted to directly detect the ZIKV RT-LAMP products. Based on the LFA reaction, hybridization occurred between the AuNPs:polyadenylated (polyA(10))-ZIKV probe and the LAMP amplicons. Subsequently, we optimized the assay parameters, including the concentration of AuNPs and migration matrices (glass fiber and nitrocellulose membrane). By employing a specific AuNP:polyA(10)-ZIKV LAMP probe, we could demonstrate the purpose and utility of primary and secondary antibodies. Owing to LFA, the resultant ZIKV RT-LAMP products were rapidly and simply assayed in less than 5 min. Further, no preparation step was required to achieve LAMP-probe hybridization, highlighting the utility of this method for field-ready ZIKV diagnosis. Collectively, our findings suggest that ZIKV RT-LAMP combined with LFA could serve as a rapid, accurate, and independent point-of-care detection method for preventing ZIKV outbreaks.
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spelling pubmed-90332462022-04-26 Zika virus lateral flow assays using reverse transcription-loop-mediated isothermal amplification Ahn, Gna Lee, SeonHyung Lee, Se Hee Baek, Yun Hee Song, Min-Suk Kim, Yang-Hoon Ahn, Ji-Young RSC Adv Chemistry Owing to the global spread of the Zika virus (ZIKV) infection, field-ready diagnostics are urgently warranted. In this study, we sought to detect ZIKV using reverse transcription loop-mediated isothermal amplification (RT-LAMP). Briefly, we performed and optimized ZIKV RT-LAMP for the analysis of biological samples (PBS, urine, and plasma). Based on our findings, this method could detect ZIKV RNA in 40 min at 63 °C without any off-target amplification. After performing specificity tests using BtsI restriction enzyme digestion, the feasibility of ZIKV RT-LAMP was determined via end-point detection with different sample matrices. Thereafter, a lateral flow assay (LFA) was conducted to directly detect the ZIKV RT-LAMP products. Based on the LFA reaction, hybridization occurred between the AuNPs:polyadenylated (polyA(10))-ZIKV probe and the LAMP amplicons. Subsequently, we optimized the assay parameters, including the concentration of AuNPs and migration matrices (glass fiber and nitrocellulose membrane). By employing a specific AuNP:polyA(10)-ZIKV LAMP probe, we could demonstrate the purpose and utility of primary and secondary antibodies. Owing to LFA, the resultant ZIKV RT-LAMP products were rapidly and simply assayed in less than 5 min. Further, no preparation step was required to achieve LAMP-probe hybridization, highlighting the utility of this method for field-ready ZIKV diagnosis. Collectively, our findings suggest that ZIKV RT-LAMP combined with LFA could serve as a rapid, accurate, and independent point-of-care detection method for preventing ZIKV outbreaks. The Royal Society of Chemistry 2021-05-18 /pmc/articles/PMC9033246/ /pubmed/35480212 http://dx.doi.org/10.1039/d1ra01227d Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Ahn, Gna
Lee, SeonHyung
Lee, Se Hee
Baek, Yun Hee
Song, Min-Suk
Kim, Yang-Hoon
Ahn, Ji-Young
Zika virus lateral flow assays using reverse transcription-loop-mediated isothermal amplification
title Zika virus lateral flow assays using reverse transcription-loop-mediated isothermal amplification
title_full Zika virus lateral flow assays using reverse transcription-loop-mediated isothermal amplification
title_fullStr Zika virus lateral flow assays using reverse transcription-loop-mediated isothermal amplification
title_full_unstemmed Zika virus lateral flow assays using reverse transcription-loop-mediated isothermal amplification
title_short Zika virus lateral flow assays using reverse transcription-loop-mediated isothermal amplification
title_sort zika virus lateral flow assays using reverse transcription-loop-mediated isothermal amplification
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9033246/
https://www.ncbi.nlm.nih.gov/pubmed/35480212
http://dx.doi.org/10.1039/d1ra01227d
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