Cargando…
ODACH: a one-shot distributed algorithm for Cox model with heterogeneous multi-center data
We developed a One-shot Distributed Algorithm for Cox proportional-hazards model to analyze Heterogeneous multi-center time-to-event data (ODACH) circumventing the need for sharing patient-level information across sites. This algorithm implements a surrogate likelihood function to approximate the Co...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9033863/ https://www.ncbi.nlm.nih.gov/pubmed/35459767 http://dx.doi.org/10.1038/s41598-022-09069-0 |
_version_ | 1784692993534459904 |
---|---|
author | Luo, Chongliang Duan, Rui Naj, Adam C. Kranzler, Henry R. Bian, Jiang Chen, Yong |
author_facet | Luo, Chongliang Duan, Rui Naj, Adam C. Kranzler, Henry R. Bian, Jiang Chen, Yong |
author_sort | Luo, Chongliang |
collection | PubMed |
description | We developed a One-shot Distributed Algorithm for Cox proportional-hazards model to analyze Heterogeneous multi-center time-to-event data (ODACH) circumventing the need for sharing patient-level information across sites. This algorithm implements a surrogate likelihood function to approximate the Cox log-partial likelihood function that is stratified by site using patient-level data from a lead site and aggregated information from other sites, allowing the baseline hazard functions and the distribution of covariates to vary across sites. Simulation studies and application to a real-world opioid use disorder study showed that ODACH provides estimates close to the pooled estimator, which analyzes patient-level data directly from all sites via a stratified Cox model. Compared to the estimator from meta-analysis, the inverse variance-weighted average of the site-specific estimates, ODACH estimator demonstrates less susceptibility to bias, especially when the event is rare. ODACH is thus a valuable privacy-preserving and communication-efficient method for analyzing multi-center time-to-event data. |
format | Online Article Text |
id | pubmed-9033863 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-90338632022-04-25 ODACH: a one-shot distributed algorithm for Cox model with heterogeneous multi-center data Luo, Chongliang Duan, Rui Naj, Adam C. Kranzler, Henry R. Bian, Jiang Chen, Yong Sci Rep Article We developed a One-shot Distributed Algorithm for Cox proportional-hazards model to analyze Heterogeneous multi-center time-to-event data (ODACH) circumventing the need for sharing patient-level information across sites. This algorithm implements a surrogate likelihood function to approximate the Cox log-partial likelihood function that is stratified by site using patient-level data from a lead site and aggregated information from other sites, allowing the baseline hazard functions and the distribution of covariates to vary across sites. Simulation studies and application to a real-world opioid use disorder study showed that ODACH provides estimates close to the pooled estimator, which analyzes patient-level data directly from all sites via a stratified Cox model. Compared to the estimator from meta-analysis, the inverse variance-weighted average of the site-specific estimates, ODACH estimator demonstrates less susceptibility to bias, especially when the event is rare. ODACH is thus a valuable privacy-preserving and communication-efficient method for analyzing multi-center time-to-event data. Nature Publishing Group UK 2022-04-22 /pmc/articles/PMC9033863/ /pubmed/35459767 http://dx.doi.org/10.1038/s41598-022-09069-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Luo, Chongliang Duan, Rui Naj, Adam C. Kranzler, Henry R. Bian, Jiang Chen, Yong ODACH: a one-shot distributed algorithm for Cox model with heterogeneous multi-center data |
title | ODACH: a one-shot distributed algorithm for Cox model with heterogeneous multi-center data |
title_full | ODACH: a one-shot distributed algorithm for Cox model with heterogeneous multi-center data |
title_fullStr | ODACH: a one-shot distributed algorithm for Cox model with heterogeneous multi-center data |
title_full_unstemmed | ODACH: a one-shot distributed algorithm for Cox model with heterogeneous multi-center data |
title_short | ODACH: a one-shot distributed algorithm for Cox model with heterogeneous multi-center data |
title_sort | odach: a one-shot distributed algorithm for cox model with heterogeneous multi-center data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9033863/ https://www.ncbi.nlm.nih.gov/pubmed/35459767 http://dx.doi.org/10.1038/s41598-022-09069-0 |
work_keys_str_mv | AT luochongliang odachaoneshotdistributedalgorithmforcoxmodelwithheterogeneousmulticenterdata AT duanrui odachaoneshotdistributedalgorithmforcoxmodelwithheterogeneousmulticenterdata AT najadamc odachaoneshotdistributedalgorithmforcoxmodelwithheterogeneousmulticenterdata AT kranzlerhenryr odachaoneshotdistributedalgorithmforcoxmodelwithheterogeneousmulticenterdata AT bianjiang odachaoneshotdistributedalgorithmforcoxmodelwithheterogeneousmulticenterdata AT chenyong odachaoneshotdistributedalgorithmforcoxmodelwithheterogeneousmulticenterdata |