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Environmental and clinical data utility in pediatric asthma exacerbation risk prediction models
BACKGROUND: Asthma exacerbations are triggered by a variety of clinical and environmental factors, but their relative impacts on exacerbation risk are unclear. There is a critical need to develop methods to identify children at high-risk for future exacerbation to allow targeted prevention measures....
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9034565/ https://www.ncbi.nlm.nih.gov/pubmed/35459216 http://dx.doi.org/10.1186/s12911-022-01847-0 |
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author | Hurst, Jillian H. Zhao, Congwen Hostetler, Haley P. Ghiasi Gorveh, Mohsen Lang, Jason E. Goldstein, Benjamin A. |
author_facet | Hurst, Jillian H. Zhao, Congwen Hostetler, Haley P. Ghiasi Gorveh, Mohsen Lang, Jason E. Goldstein, Benjamin A. |
author_sort | Hurst, Jillian H. |
collection | PubMed |
description | BACKGROUND: Asthma exacerbations are triggered by a variety of clinical and environmental factors, but their relative impacts on exacerbation risk are unclear. There is a critical need to develop methods to identify children at high-risk for future exacerbation to allow targeted prevention measures. We sought to evaluate the utility of models using spatiotemporally resolved climatic data and individual electronic health records (EHR) in predicting pediatric asthma exacerbations. METHODS: We extracted retrospective EHR data for 5982 children with asthma who had an encounter within the Duke University Health System between January 1, 2014 and December 31, 2019. EHR data were linked to spatially resolved environmental data, and temporally resolved climate, pollution, allergen, and influenza case data. We used xgBoost to build predictive models of asthma exacerbation over 30–180 day time horizons, and evaluated the contributions of different data types to model performance. RESULTS: Models using readily available EHR data performed moderately well, as measured by the area under the receiver operating characteristic curve (AUC 0.730–0.742) over all three time horizons. Inclusion of spatial and temporal data did not significantly improve model performance. Generating a decision rule with a sensitivity of 70% produced a positive predictive value of 13.8% for 180 day outcomes but only 2.9% for 30 day outcomes. CONCLUSIONS: EHR data-based models perform moderately wellover a 30–180 day time horizon to identify children who would benefit from asthma exacerbation prevention measures. Due to the low rate of exacerbations, longer-term models are likely to be most clinically useful. Trial Registration: Not applicable. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12911-022-01847-0. |
format | Online Article Text |
id | pubmed-9034565 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-90345652022-04-24 Environmental and clinical data utility in pediatric asthma exacerbation risk prediction models Hurst, Jillian H. Zhao, Congwen Hostetler, Haley P. Ghiasi Gorveh, Mohsen Lang, Jason E. Goldstein, Benjamin A. BMC Med Inform Decis Mak Research BACKGROUND: Asthma exacerbations are triggered by a variety of clinical and environmental factors, but their relative impacts on exacerbation risk are unclear. There is a critical need to develop methods to identify children at high-risk for future exacerbation to allow targeted prevention measures. We sought to evaluate the utility of models using spatiotemporally resolved climatic data and individual electronic health records (EHR) in predicting pediatric asthma exacerbations. METHODS: We extracted retrospective EHR data for 5982 children with asthma who had an encounter within the Duke University Health System between January 1, 2014 and December 31, 2019. EHR data were linked to spatially resolved environmental data, and temporally resolved climate, pollution, allergen, and influenza case data. We used xgBoost to build predictive models of asthma exacerbation over 30–180 day time horizons, and evaluated the contributions of different data types to model performance. RESULTS: Models using readily available EHR data performed moderately well, as measured by the area under the receiver operating characteristic curve (AUC 0.730–0.742) over all three time horizons. Inclusion of spatial and temporal data did not significantly improve model performance. Generating a decision rule with a sensitivity of 70% produced a positive predictive value of 13.8% for 180 day outcomes but only 2.9% for 30 day outcomes. CONCLUSIONS: EHR data-based models perform moderately wellover a 30–180 day time horizon to identify children who would benefit from asthma exacerbation prevention measures. Due to the low rate of exacerbations, longer-term models are likely to be most clinically useful. Trial Registration: Not applicable. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12911-022-01847-0. BioMed Central 2022-04-22 /pmc/articles/PMC9034565/ /pubmed/35459216 http://dx.doi.org/10.1186/s12911-022-01847-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Hurst, Jillian H. Zhao, Congwen Hostetler, Haley P. Ghiasi Gorveh, Mohsen Lang, Jason E. Goldstein, Benjamin A. Environmental and clinical data utility in pediatric asthma exacerbation risk prediction models |
title | Environmental and clinical data utility in pediatric asthma exacerbation risk prediction models |
title_full | Environmental and clinical data utility in pediatric asthma exacerbation risk prediction models |
title_fullStr | Environmental and clinical data utility in pediatric asthma exacerbation risk prediction models |
title_full_unstemmed | Environmental and clinical data utility in pediatric asthma exacerbation risk prediction models |
title_short | Environmental and clinical data utility in pediatric asthma exacerbation risk prediction models |
title_sort | environmental and clinical data utility in pediatric asthma exacerbation risk prediction models |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9034565/ https://www.ncbi.nlm.nih.gov/pubmed/35459216 http://dx.doi.org/10.1186/s12911-022-01847-0 |
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