Cargando…

Whole exome sequencing identified a novel compound heterozygous variation in COL7A1 gene causing dystrophic epidermolysis bullosa

Dystrophic epidermolysis bullosa (DEB) is a series of severe genetic conditions affecting skin and nails caused by mutations in the COL7A1 gene. DEB has a strong phenotypic variability. In the present study, we recruited a case with a boy exhibiting typical DEB indication, and performed a clinical,...

Descripción completa

Detalles Bibliográficos
Autores principales: Cui, Li‐min, Jiang, Jian‐ye, Hu, Ning‐ning, Zou, Hong‐en, Zhao, Bao‐zhen, Han, Cong‐ying, Yang, Kai, Wang, Yi‐peng, Xing, Huan‐xia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9034672/
https://www.ncbi.nlm.nih.gov/pubmed/35225434
http://dx.doi.org/10.1002/mgg3.1907
_version_ 1784693160329347072
author Cui, Li‐min
Jiang, Jian‐ye
Hu, Ning‐ning
Zou, Hong‐en
Zhao, Bao‐zhen
Han, Cong‐ying
Yang, Kai
Wang, Yi‐peng
Xing, Huan‐xia
author_facet Cui, Li‐min
Jiang, Jian‐ye
Hu, Ning‐ning
Zou, Hong‐en
Zhao, Bao‐zhen
Han, Cong‐ying
Yang, Kai
Wang, Yi‐peng
Xing, Huan‐xia
author_sort Cui, Li‐min
collection PubMed
description Dystrophic epidermolysis bullosa (DEB) is a series of severe genetic conditions affecting skin and nails caused by mutations in the COL7A1 gene. DEB has a strong phenotypic variability. In the present study, we recruited a case with a boy exhibiting typical DEB indication, and performed a clinical, genetic, and experimental investigation, followed by a prenatal diagnosis on their current pregnancy. Whole exome sequencing identified a novel compound heterozygous variation in COL7A1, consisting of two variants, namely c.191T>C (p.Leu64Pro) and c.5124G>A (p.Leu1708=) in the proband. In vitro study by minigene system indicated that c.5124G>A would result in an increased ratio of a transcript with exon‐skipping, which supported its pathogenicity. Further prenatal detection confirmed the genotype–phenotye co‐separation in this family. In conclusion, the findings in our study expanded the mutation spectrum of DEB, and emphasized the importance of paying attention to specific synonymous variants in the filtering process.
format Online
Article
Text
id pubmed-9034672
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-90346722022-04-25 Whole exome sequencing identified a novel compound heterozygous variation in COL7A1 gene causing dystrophic epidermolysis bullosa Cui, Li‐min Jiang, Jian‐ye Hu, Ning‐ning Zou, Hong‐en Zhao, Bao‐zhen Han, Cong‐ying Yang, Kai Wang, Yi‐peng Xing, Huan‐xia Mol Genet Genomic Med Original Articles Dystrophic epidermolysis bullosa (DEB) is a series of severe genetic conditions affecting skin and nails caused by mutations in the COL7A1 gene. DEB has a strong phenotypic variability. In the present study, we recruited a case with a boy exhibiting typical DEB indication, and performed a clinical, genetic, and experimental investigation, followed by a prenatal diagnosis on their current pregnancy. Whole exome sequencing identified a novel compound heterozygous variation in COL7A1, consisting of two variants, namely c.191T>C (p.Leu64Pro) and c.5124G>A (p.Leu1708=) in the proband. In vitro study by minigene system indicated that c.5124G>A would result in an increased ratio of a transcript with exon‐skipping, which supported its pathogenicity. Further prenatal detection confirmed the genotype–phenotye co‐separation in this family. In conclusion, the findings in our study expanded the mutation spectrum of DEB, and emphasized the importance of paying attention to specific synonymous variants in the filtering process. John Wiley and Sons Inc. 2022-02-28 /pmc/articles/PMC9034672/ /pubmed/35225434 http://dx.doi.org/10.1002/mgg3.1907 Text en © 2022 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Original Articles
Cui, Li‐min
Jiang, Jian‐ye
Hu, Ning‐ning
Zou, Hong‐en
Zhao, Bao‐zhen
Han, Cong‐ying
Yang, Kai
Wang, Yi‐peng
Xing, Huan‐xia
Whole exome sequencing identified a novel compound heterozygous variation in COL7A1 gene causing dystrophic epidermolysis bullosa
title Whole exome sequencing identified a novel compound heterozygous variation in COL7A1 gene causing dystrophic epidermolysis bullosa
title_full Whole exome sequencing identified a novel compound heterozygous variation in COL7A1 gene causing dystrophic epidermolysis bullosa
title_fullStr Whole exome sequencing identified a novel compound heterozygous variation in COL7A1 gene causing dystrophic epidermolysis bullosa
title_full_unstemmed Whole exome sequencing identified a novel compound heterozygous variation in COL7A1 gene causing dystrophic epidermolysis bullosa
title_short Whole exome sequencing identified a novel compound heterozygous variation in COL7A1 gene causing dystrophic epidermolysis bullosa
title_sort whole exome sequencing identified a novel compound heterozygous variation in col7a1 gene causing dystrophic epidermolysis bullosa
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9034672/
https://www.ncbi.nlm.nih.gov/pubmed/35225434
http://dx.doi.org/10.1002/mgg3.1907
work_keys_str_mv AT cuilimin wholeexomesequencingidentifiedanovelcompoundheterozygousvariationincol7a1genecausingdystrophicepidermolysisbullosa
AT jiangjianye wholeexomesequencingidentifiedanovelcompoundheterozygousvariationincol7a1genecausingdystrophicepidermolysisbullosa
AT huningning wholeexomesequencingidentifiedanovelcompoundheterozygousvariationincol7a1genecausingdystrophicepidermolysisbullosa
AT zouhongen wholeexomesequencingidentifiedanovelcompoundheterozygousvariationincol7a1genecausingdystrophicepidermolysisbullosa
AT zhaobaozhen wholeexomesequencingidentifiedanovelcompoundheterozygousvariationincol7a1genecausingdystrophicepidermolysisbullosa
AT hancongying wholeexomesequencingidentifiedanovelcompoundheterozygousvariationincol7a1genecausingdystrophicepidermolysisbullosa
AT yangkai wholeexomesequencingidentifiedanovelcompoundheterozygousvariationincol7a1genecausingdystrophicepidermolysisbullosa
AT wangyipeng wholeexomesequencingidentifiedanovelcompoundheterozygousvariationincol7a1genecausingdystrophicepidermolysisbullosa
AT xinghuanxia wholeexomesequencingidentifiedanovelcompoundheterozygousvariationincol7a1genecausingdystrophicepidermolysisbullosa