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A Multitask Deep Learning Framework for DNER

Over the years, the explosive growth of drug-related text information has resulted in heavy loads of work for manual data processing. However, the domain knowledge hidden is believed to be crucial to biomedical research and applications. In this article, the multi-DTR model that can accurately recog...

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Detalles Bibliográficos
Autores principales: Jin, Ran, Hou, Tengda, Yu, Tongrui, Luo, Min, Hu, Haoliang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9034928/
https://www.ncbi.nlm.nih.gov/pubmed/35469206
http://dx.doi.org/10.1155/2022/3321296
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author Jin, Ran
Hou, Tengda
Yu, Tongrui
Luo, Min
Hu, Haoliang
author_facet Jin, Ran
Hou, Tengda
Yu, Tongrui
Luo, Min
Hu, Haoliang
author_sort Jin, Ran
collection PubMed
description Over the years, the explosive growth of drug-related text information has resulted in heavy loads of work for manual data processing. However, the domain knowledge hidden is believed to be crucial to biomedical research and applications. In this article, the multi-DTR model that can accurately recognize drug-specific name by joint modeling of DNER and DNEN was proposed. Character features were extracted by CNN out of the input text, and the context-sensitive word vectors were obtained using ELMo. Next, the pretrained biomedical words were embedded into BiLSTM-CRF and the output labels were interacted to update the task parameters until DNER and DNEN would support each other. The proposed method was found with better performance on the DDI2011 and DDI2013 datasets.
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spelling pubmed-90349282022-04-24 A Multitask Deep Learning Framework for DNER Jin, Ran Hou, Tengda Yu, Tongrui Luo, Min Hu, Haoliang Comput Intell Neurosci Research Article Over the years, the explosive growth of drug-related text information has resulted in heavy loads of work for manual data processing. However, the domain knowledge hidden is believed to be crucial to biomedical research and applications. In this article, the multi-DTR model that can accurately recognize drug-specific name by joint modeling of DNER and DNEN was proposed. Character features were extracted by CNN out of the input text, and the context-sensitive word vectors were obtained using ELMo. Next, the pretrained biomedical words were embedded into BiLSTM-CRF and the output labels were interacted to update the task parameters until DNER and DNEN would support each other. The proposed method was found with better performance on the DDI2011 and DDI2013 datasets. Hindawi 2022-04-16 /pmc/articles/PMC9034928/ /pubmed/35469206 http://dx.doi.org/10.1155/2022/3321296 Text en Copyright © 2022 Ran Jin et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Jin, Ran
Hou, Tengda
Yu, Tongrui
Luo, Min
Hu, Haoliang
A Multitask Deep Learning Framework for DNER
title A Multitask Deep Learning Framework for DNER
title_full A Multitask Deep Learning Framework for DNER
title_fullStr A Multitask Deep Learning Framework for DNER
title_full_unstemmed A Multitask Deep Learning Framework for DNER
title_short A Multitask Deep Learning Framework for DNER
title_sort multitask deep learning framework for dner
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9034928/
https://www.ncbi.nlm.nih.gov/pubmed/35469206
http://dx.doi.org/10.1155/2022/3321296
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