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The Impact of Different Cell Culture Mediums on CD8+T Cells Expansion: A Bioinformatics Study
OBJECTIVE: Different Cell Culture medias can affect the expansion of T cells. The aim of this study is to assess signaling pathways, protein interactions and genes in T cells cultured in different common T cell expansion medias to select the best candidate. MATERIALS AND METHODS: In this in silico o...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royan Institute
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9035229/ https://www.ncbi.nlm.nih.gov/pubmed/35451586 http://dx.doi.org/10.22074/cellj.2022.7779 |
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author | Jalili, Arsalan Hajifathali, Abbas Bereimipour, Ahmad Roshandel, Elham Aghdami, Nasser |
author_facet | Jalili, Arsalan Hajifathali, Abbas Bereimipour, Ahmad Roshandel, Elham Aghdami, Nasser |
author_sort | Jalili, Arsalan |
collection | PubMed |
description | OBJECTIVE: Different Cell Culture medias can affect the expansion of T cells. The aim of this study is to assess signaling pathways, protein interactions and genes in T cells cultured in different common T cell expansion medias to select the best candidate. MATERIALS AND METHODS: In this in silico observational study, with the use of bioinformatics analysis and the use of enrichment databases, gene expression profiles were investigated using microarray analysis. RESULTS: The results of this study were the joint selection of 26 upregulated genes and 59 downregulated genes that were involved in SREBP control of lipid synthesis, co-stimulatory signal during T-cell activation mitosis and chromosome dynamics, telomeres, telomerase, and cellular aging signal pathways. CONCLUSION: Using bioinformatics analyzes, integrated and regular genes were selected as common genes CD80, LST1, ATM and ITM2B 4-1BBL, Akt inhibitor, interleukin 7 and 15 expansion media. |
format | Online Article Text |
id | pubmed-9035229 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Royan Institute |
record_format | MEDLINE/PubMed |
spelling | pubmed-90352292022-05-05 The Impact of Different Cell Culture Mediums on CD8+T Cells Expansion: A Bioinformatics Study Jalili, Arsalan Hajifathali, Abbas Bereimipour, Ahmad Roshandel, Elham Aghdami, Nasser Cell J Original Article OBJECTIVE: Different Cell Culture medias can affect the expansion of T cells. The aim of this study is to assess signaling pathways, protein interactions and genes in T cells cultured in different common T cell expansion medias to select the best candidate. MATERIALS AND METHODS: In this in silico observational study, with the use of bioinformatics analysis and the use of enrichment databases, gene expression profiles were investigated using microarray analysis. RESULTS: The results of this study were the joint selection of 26 upregulated genes and 59 downregulated genes that were involved in SREBP control of lipid synthesis, co-stimulatory signal during T-cell activation mitosis and chromosome dynamics, telomeres, telomerase, and cellular aging signal pathways. CONCLUSION: Using bioinformatics analyzes, integrated and regular genes were selected as common genes CD80, LST1, ATM and ITM2B 4-1BBL, Akt inhibitor, interleukin 7 and 15 expansion media. Royan Institute 2022-03 2022-03-13 /pmc/articles/PMC9035229/ /pubmed/35451586 http://dx.doi.org/10.22074/cellj.2022.7779 Text en Any use, distribution, reproduction or abstract of this publication in any medium, with the exception of commercial purposes, is permitted provided the original work is properly cited. https://creativecommons.org/licenses/by-nc/3.0/This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial 3.0 (CC BY-NC 3.0) License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Jalili, Arsalan Hajifathali, Abbas Bereimipour, Ahmad Roshandel, Elham Aghdami, Nasser The Impact of Different Cell Culture Mediums on CD8+T Cells Expansion: A Bioinformatics Study |
title | The Impact of Different Cell Culture Mediums on CD8+T Cells
Expansion: A Bioinformatics Study |
title_full | The Impact of Different Cell Culture Mediums on CD8+T Cells
Expansion: A Bioinformatics Study |
title_fullStr | The Impact of Different Cell Culture Mediums on CD8+T Cells
Expansion: A Bioinformatics Study |
title_full_unstemmed | The Impact of Different Cell Culture Mediums on CD8+T Cells
Expansion: A Bioinformatics Study |
title_short | The Impact of Different Cell Culture Mediums on CD8+T Cells
Expansion: A Bioinformatics Study |
title_sort | impact of different cell culture mediums on cd8+t cells
expansion: a bioinformatics study |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9035229/ https://www.ncbi.nlm.nih.gov/pubmed/35451586 http://dx.doi.org/10.22074/cellj.2022.7779 |
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