Cargando…
The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation
The study of interactions between biomolecules and carbon nanotubes (CNTs) is of great importance in CNT-based drug delivery systems and biomedical devices. In this work, the transport of polyarginine (R8) peptide through CNTs under an external electric field was investigated via all-atom molecular...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9036599/ https://www.ncbi.nlm.nih.gov/pubmed/35479828 http://dx.doi.org/10.1039/d0ra09184g |
_version_ | 1784693553012670464 |
---|---|
author | Li, Wen Cheng, Shun Wang, Bin Mao, Zheng Zhang, Jianhua Zhang, Youyu Liu, Qing Huo |
author_facet | Li, Wen Cheng, Shun Wang, Bin Mao, Zheng Zhang, Jianhua Zhang, Youyu Liu, Qing Huo |
author_sort | Li, Wen |
collection | PubMed |
description | The study of interactions between biomolecules and carbon nanotubes (CNTs) is of great importance in CNT-based drug delivery systems and biomedical devices. In this work, the transport of polyarginine (R8) peptide through CNTs under an external electric field was investigated via all-atom molecular dynamics (AAMD) simulation. It was found that the electric field can assist the R8 peptide to overcome the resistance and make the transport smooth. Moreover, the efficiency of transport was improved with the increasing intensity of the electric field in a suitable range. In addition, we also investigated the effects of different types of CNTs on the transport of the R8 peptide and found that the single-walled carbon nanotube (SWCNT) was more suitable for transporting the R8 peptide than the double-walled carbon nanotube (DWCNT) due to its lower energy barrier to the R8 peptide. All these findings shed light on the role of the electric field on the transport of the R8 peptide through CNTs and also gave some valuable insights into the effects of CNT types on the transport process of the peptide. |
format | Online Article Text |
id | pubmed-9036599 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-90365992022-04-26 The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation Li, Wen Cheng, Shun Wang, Bin Mao, Zheng Zhang, Jianhua Zhang, Youyu Liu, Qing Huo RSC Adv Chemistry The study of interactions between biomolecules and carbon nanotubes (CNTs) is of great importance in CNT-based drug delivery systems and biomedical devices. In this work, the transport of polyarginine (R8) peptide through CNTs under an external electric field was investigated via all-atom molecular dynamics (AAMD) simulation. It was found that the electric field can assist the R8 peptide to overcome the resistance and make the transport smooth. Moreover, the efficiency of transport was improved with the increasing intensity of the electric field in a suitable range. In addition, we also investigated the effects of different types of CNTs on the transport of the R8 peptide and found that the single-walled carbon nanotube (SWCNT) was more suitable for transporting the R8 peptide than the double-walled carbon nanotube (DWCNT) due to its lower energy barrier to the R8 peptide. All these findings shed light on the role of the electric field on the transport of the R8 peptide through CNTs and also gave some valuable insights into the effects of CNT types on the transport process of the peptide. The Royal Society of Chemistry 2021-07-05 /pmc/articles/PMC9036599/ /pubmed/35479828 http://dx.doi.org/10.1039/d0ra09184g Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/ |
spellingShingle | Chemistry Li, Wen Cheng, Shun Wang, Bin Mao, Zheng Zhang, Jianhua Zhang, Youyu Liu, Qing Huo The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation |
title | The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation |
title_full | The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation |
title_fullStr | The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation |
title_full_unstemmed | The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation |
title_short | The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation |
title_sort | transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9036599/ https://www.ncbi.nlm.nih.gov/pubmed/35479828 http://dx.doi.org/10.1039/d0ra09184g |
work_keys_str_mv | AT liwen thetransportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT chengshun thetransportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT wangbin thetransportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT maozheng thetransportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT zhangjianhua thetransportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT zhangyouyu thetransportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT liuqinghuo thetransportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT liwen transportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT chengshun transportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT wangbin transportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT maozheng transportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT zhangjianhua transportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT zhangyouyu transportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation AT liuqinghuo transportofachargedpeptidethroughcarbonnanotubesunderanexternalelectricfieldamoleculardynamicssimulation |