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The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation

The study of interactions between biomolecules and carbon nanotubes (CNTs) is of great importance in CNT-based drug delivery systems and biomedical devices. In this work, the transport of polyarginine (R8) peptide through CNTs under an external electric field was investigated via all-atom molecular...

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Autores principales: Li, Wen, Cheng, Shun, Wang, Bin, Mao, Zheng, Zhang, Jianhua, Zhang, Youyu, Liu, Qing Huo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9036599/
https://www.ncbi.nlm.nih.gov/pubmed/35479828
http://dx.doi.org/10.1039/d0ra09184g
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author Li, Wen
Cheng, Shun
Wang, Bin
Mao, Zheng
Zhang, Jianhua
Zhang, Youyu
Liu, Qing Huo
author_facet Li, Wen
Cheng, Shun
Wang, Bin
Mao, Zheng
Zhang, Jianhua
Zhang, Youyu
Liu, Qing Huo
author_sort Li, Wen
collection PubMed
description The study of interactions between biomolecules and carbon nanotubes (CNTs) is of great importance in CNT-based drug delivery systems and biomedical devices. In this work, the transport of polyarginine (R8) peptide through CNTs under an external electric field was investigated via all-atom molecular dynamics (AAMD) simulation. It was found that the electric field can assist the R8 peptide to overcome the resistance and make the transport smooth. Moreover, the efficiency of transport was improved with the increasing intensity of the electric field in a suitable range. In addition, we also investigated the effects of different types of CNTs on the transport of the R8 peptide and found that the single-walled carbon nanotube (SWCNT) was more suitable for transporting the R8 peptide than the double-walled carbon nanotube (DWCNT) due to its lower energy barrier to the R8 peptide. All these findings shed light on the role of the electric field on the transport of the R8 peptide through CNTs and also gave some valuable insights into the effects of CNT types on the transport process of the peptide.
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spelling pubmed-90365992022-04-26 The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation Li, Wen Cheng, Shun Wang, Bin Mao, Zheng Zhang, Jianhua Zhang, Youyu Liu, Qing Huo RSC Adv Chemistry The study of interactions between biomolecules and carbon nanotubes (CNTs) is of great importance in CNT-based drug delivery systems and biomedical devices. In this work, the transport of polyarginine (R8) peptide through CNTs under an external electric field was investigated via all-atom molecular dynamics (AAMD) simulation. It was found that the electric field can assist the R8 peptide to overcome the resistance and make the transport smooth. Moreover, the efficiency of transport was improved with the increasing intensity of the electric field in a suitable range. In addition, we also investigated the effects of different types of CNTs on the transport of the R8 peptide and found that the single-walled carbon nanotube (SWCNT) was more suitable for transporting the R8 peptide than the double-walled carbon nanotube (DWCNT) due to its lower energy barrier to the R8 peptide. All these findings shed light on the role of the electric field on the transport of the R8 peptide through CNTs and also gave some valuable insights into the effects of CNT types on the transport process of the peptide. The Royal Society of Chemistry 2021-07-05 /pmc/articles/PMC9036599/ /pubmed/35479828 http://dx.doi.org/10.1039/d0ra09184g Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Li, Wen
Cheng, Shun
Wang, Bin
Mao, Zheng
Zhang, Jianhua
Zhang, Youyu
Liu, Qing Huo
The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation
title The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation
title_full The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation
title_fullStr The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation
title_full_unstemmed The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation
title_short The transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation
title_sort transport of a charged peptide through carbon nanotubes under an external electric field: a molecular dynamics simulation
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9036599/
https://www.ncbi.nlm.nih.gov/pubmed/35479828
http://dx.doi.org/10.1039/d0ra09184g
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