Characterization and phylogenetic analysis of the complete chloroplast genome sequence of xerophyta retinervis (velloziaceae)

Xerophyta retinervis has great ornamental value and numerous traditional uses. This study reported its first complete chloroplast genome sequence, which was 155,109 bp in length, including a pair of inverted repeat regions (IRs) (27,093 bp), a small single-copy (SSC) region (17,385 bp), and a large...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Junyi, Liao, Min, Li, Xiong, Xu, Bo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9037161/
https://www.ncbi.nlm.nih.gov/pubmed/35478856
http://dx.doi.org/10.1080/23802359.2022.2067500
_version_ 1784693673846374400
author Zhang, Junyi
Liao, Min
Li, Xiong
Xu, Bo
author_facet Zhang, Junyi
Liao, Min
Li, Xiong
Xu, Bo
author_sort Zhang, Junyi
collection PubMed
description Xerophyta retinervis has great ornamental value and numerous traditional uses. This study reported its first complete chloroplast genome sequence, which was 155,109 bp in length, including a pair of inverted repeat regions (IRs) (27,093 bp), a small single-copy (SSC) region (17,385 bp), and a large single-copy (LSC) region (83,538bp). The chloroplast genome encoded 133 genes, including 87 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The total GC content of the chloroplast genome was 37.55%. The phylogenetic tree showed that X. retinervis was closely related to X. spekei.
format Online
Article
Text
id pubmed-9037161
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-90371612022-04-26 Characterization and phylogenetic analysis of the complete chloroplast genome sequence of xerophyta retinervis (velloziaceae) Zhang, Junyi Liao, Min Li, Xiong Xu, Bo Mitochondrial DNA B Resour Mitogenome Announcement Xerophyta retinervis has great ornamental value and numerous traditional uses. This study reported its first complete chloroplast genome sequence, which was 155,109 bp in length, including a pair of inverted repeat regions (IRs) (27,093 bp), a small single-copy (SSC) region (17,385 bp), and a large single-copy (LSC) region (83,538bp). The chloroplast genome encoded 133 genes, including 87 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The total GC content of the chloroplast genome was 37.55%. The phylogenetic tree showed that X. retinervis was closely related to X. spekei. Taylor & Francis 2022-04-21 /pmc/articles/PMC9037161/ /pubmed/35478856 http://dx.doi.org/10.1080/23802359.2022.2067500 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Junyi
Liao, Min
Li, Xiong
Xu, Bo
Characterization and phylogenetic analysis of the complete chloroplast genome sequence of xerophyta retinervis (velloziaceae)
title Characterization and phylogenetic analysis of the complete chloroplast genome sequence of xerophyta retinervis (velloziaceae)
title_full Characterization and phylogenetic analysis of the complete chloroplast genome sequence of xerophyta retinervis (velloziaceae)
title_fullStr Characterization and phylogenetic analysis of the complete chloroplast genome sequence of xerophyta retinervis (velloziaceae)
title_full_unstemmed Characterization and phylogenetic analysis of the complete chloroplast genome sequence of xerophyta retinervis (velloziaceae)
title_short Characterization and phylogenetic analysis of the complete chloroplast genome sequence of xerophyta retinervis (velloziaceae)
title_sort characterization and phylogenetic analysis of the complete chloroplast genome sequence of xerophyta retinervis (velloziaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9037161/
https://www.ncbi.nlm.nih.gov/pubmed/35478856
http://dx.doi.org/10.1080/23802359.2022.2067500
work_keys_str_mv AT zhangjunyi characterizationandphylogeneticanalysisofthecompletechloroplastgenomesequenceofxerophytaretinervisvelloziaceae
AT liaomin characterizationandphylogeneticanalysisofthecompletechloroplastgenomesequenceofxerophytaretinervisvelloziaceae
AT lixiong characterizationandphylogeneticanalysisofthecompletechloroplastgenomesequenceofxerophytaretinervisvelloziaceae
AT xubo characterizationandphylogeneticanalysisofthecompletechloroplastgenomesequenceofxerophytaretinervisvelloziaceae

Ejemplares similares