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Phylogenetic relationship and characterization of the complete mitochondrial genome of Camponotus japonicus (Hymenoptera: Formicoidea: Formicidae)

Camponotus japonicus Mayr, 1866 is a widespread and open-field formicine ant species in east Asia. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of C. japonicus. This mitogenome was 16,422 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA g...

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Autores principales: Shen, Shuo, Li, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9037170/
https://www.ncbi.nlm.nih.gov/pubmed/35478859
http://dx.doi.org/10.1080/23802359.2022.2067495
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author Shen, Shuo
Li, Wei
author_facet Shen, Shuo
Li, Wei
author_sort Shen, Shuo
collection PubMed
description Camponotus japonicus Mayr, 1866 is a widespread and open-field formicine ant species in east Asia. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of C. japonicus. This mitogenome was 16,422 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and two ribosomal RNA unit genes (rRNAs). Gene order was conserved and identical to most other previously sequenced Formicidae. All PCGs of C. japonicus have the conventional start codon for invertebrate mitochondrial PCGs (five ATT, four ATA and four ATG). All PCGs terminated with the stop codon TAA. The whole mitogenome exhibited heavy AT nucleotide bias (77.8%). Phylogenetic analysis positioned C. japonicus in a well-supported clade with C. atrox and C. concavus, and C. japonicus was more closely related to C. atrox than to C. concavus. Within Formicinae, the topology (Colobopsis + (Polyrhachis + Camponotus) + (Formica + (Nylanderia + Lasius) + (Anoplolepis + Acropyga))) was recovered.
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spelling pubmed-90371702022-04-26 Phylogenetic relationship and characterization of the complete mitochondrial genome of Camponotus japonicus (Hymenoptera: Formicoidea: Formicidae) Shen, Shuo Li, Wei Mitochondrial DNA B Resour Mitogenome Announcement Camponotus japonicus Mayr, 1866 is a widespread and open-field formicine ant species in east Asia. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of C. japonicus. This mitogenome was 16,422 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and two ribosomal RNA unit genes (rRNAs). Gene order was conserved and identical to most other previously sequenced Formicidae. All PCGs of C. japonicus have the conventional start codon for invertebrate mitochondrial PCGs (five ATT, four ATA and four ATG). All PCGs terminated with the stop codon TAA. The whole mitogenome exhibited heavy AT nucleotide bias (77.8%). Phylogenetic analysis positioned C. japonicus in a well-supported clade with C. atrox and C. concavus, and C. japonicus was more closely related to C. atrox than to C. concavus. Within Formicinae, the topology (Colobopsis + (Polyrhachis + Camponotus) + (Formica + (Nylanderia + Lasius) + (Anoplolepis + Acropyga))) was recovered. Taylor & Francis 2022-04-22 /pmc/articles/PMC9037170/ /pubmed/35478859 http://dx.doi.org/10.1080/23802359.2022.2067495 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Shen, Shuo
Li, Wei
Phylogenetic relationship and characterization of the complete mitochondrial genome of Camponotus japonicus (Hymenoptera: Formicoidea: Formicidae)
title Phylogenetic relationship and characterization of the complete mitochondrial genome of Camponotus japonicus (Hymenoptera: Formicoidea: Formicidae)
title_full Phylogenetic relationship and characterization of the complete mitochondrial genome of Camponotus japonicus (Hymenoptera: Formicoidea: Formicidae)
title_fullStr Phylogenetic relationship and characterization of the complete mitochondrial genome of Camponotus japonicus (Hymenoptera: Formicoidea: Formicidae)
title_full_unstemmed Phylogenetic relationship and characterization of the complete mitochondrial genome of Camponotus japonicus (Hymenoptera: Formicoidea: Formicidae)
title_short Phylogenetic relationship and characterization of the complete mitochondrial genome of Camponotus japonicus (Hymenoptera: Formicoidea: Formicidae)
title_sort phylogenetic relationship and characterization of the complete mitochondrial genome of camponotus japonicus (hymenoptera: formicoidea: formicidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9037170/
https://www.ncbi.nlm.nih.gov/pubmed/35478859
http://dx.doi.org/10.1080/23802359.2022.2067495
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