The complete chloroplast genome sequence of Ehretia dicksonii Hance (Ehretiaceae)

Ehretia dicksonii_Hance 1862 is a deciduous botany of Ehretiaceae. In this work, the complete chloroplast (cp) genome sequence of E. dicksonii was probed by next generation sequencing in an effort to provide genomic resources useful for promoting its conservation. The complete cp genome of E. dickso...

Descripción completa

Detalles Bibliográficos
Autores principales: Xu, Xiaogang, Cheng, Yao, Tong, Lili, Tian, Lu, Xia, Chongli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9037173/
https://www.ncbi.nlm.nih.gov/pubmed/35478862
http://dx.doi.org/10.1080/23802359.2022.2061873
_version_ 1784693676840058880
author Xu, Xiaogang
Cheng, Yao
Tong, Lili
Tian, Lu
Xia, Chongli
author_facet Xu, Xiaogang
Cheng, Yao
Tong, Lili
Tian, Lu
Xia, Chongli
author_sort Xu, Xiaogang
collection PubMed
description Ehretia dicksonii_Hance 1862 is a deciduous botany of Ehretiaceae. In this work, the complete chloroplast (cp) genome sequence of E. dicksonii was probed by next generation sequencing in an effort to provide genomic resources useful for promoting its conservation. The complete cp genome of E. dicksonii is 156,623 bp in length, including a large single-copy (LSC) region of 86,853 bp, and a small single-copy (SSC) region of 18,150 bp. It contains 133 genes, including 37 tRNA genes, 8 rRNA genes, and 88 protein-coding genes. The overall GC content of E. dicksonii chloroplast genome is 37.85%. The phylogenetic analysis suggests that E. dicksonii is in the clade of Ehretiaceae other than Boraginaceae. Also, E. dicksonii has a close relationship with Ehretia acuminata_Brown 1810 in Ehretiaceae.
format Online
Article
Text
id pubmed-9037173
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-90371732022-04-26 The complete chloroplast genome sequence of Ehretia dicksonii Hance (Ehretiaceae) Xu, Xiaogang Cheng, Yao Tong, Lili Tian, Lu Xia, Chongli Mitochondrial DNA B Resour Mitogenome Announcement Ehretia dicksonii_Hance 1862 is a deciduous botany of Ehretiaceae. In this work, the complete chloroplast (cp) genome sequence of E. dicksonii was probed by next generation sequencing in an effort to provide genomic resources useful for promoting its conservation. The complete cp genome of E. dicksonii is 156,623 bp in length, including a large single-copy (LSC) region of 86,853 bp, and a small single-copy (SSC) region of 18,150 bp. It contains 133 genes, including 37 tRNA genes, 8 rRNA genes, and 88 protein-coding genes. The overall GC content of E. dicksonii chloroplast genome is 37.85%. The phylogenetic analysis suggests that E. dicksonii is in the clade of Ehretiaceae other than Boraginaceae. Also, E. dicksonii has a close relationship with Ehretia acuminata_Brown 1810 in Ehretiaceae. Taylor & Francis 2022-04-14 /pmc/articles/PMC9037173/ /pubmed/35478862 http://dx.doi.org/10.1080/23802359.2022.2061873 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xu, Xiaogang
Cheng, Yao
Tong, Lili
Tian, Lu
Xia, Chongli
The complete chloroplast genome sequence of Ehretia dicksonii Hance (Ehretiaceae)
title The complete chloroplast genome sequence of Ehretia dicksonii Hance (Ehretiaceae)
title_full The complete chloroplast genome sequence of Ehretia dicksonii Hance (Ehretiaceae)
title_fullStr The complete chloroplast genome sequence of Ehretia dicksonii Hance (Ehretiaceae)
title_full_unstemmed The complete chloroplast genome sequence of Ehretia dicksonii Hance (Ehretiaceae)
title_short The complete chloroplast genome sequence of Ehretia dicksonii Hance (Ehretiaceae)
title_sort complete chloroplast genome sequence of ehretia dicksonii hance (ehretiaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9037173/
https://www.ncbi.nlm.nih.gov/pubmed/35478862
http://dx.doi.org/10.1080/23802359.2022.2061873
work_keys_str_mv AT xuxiaogang thecompletechloroplastgenomesequenceofehretiadicksoniihanceehretiaceae
AT chengyao thecompletechloroplastgenomesequenceofehretiadicksoniihanceehretiaceae
AT tonglili thecompletechloroplastgenomesequenceofehretiadicksoniihanceehretiaceae
AT tianlu thecompletechloroplastgenomesequenceofehretiadicksoniihanceehretiaceae
AT xiachongli thecompletechloroplastgenomesequenceofehretiadicksoniihanceehretiaceae
AT xuxiaogang completechloroplastgenomesequenceofehretiadicksoniihanceehretiaceae
AT chengyao completechloroplastgenomesequenceofehretiadicksoniihanceehretiaceae
AT tonglili completechloroplastgenomesequenceofehretiadicksoniihanceehretiaceae
AT tianlu completechloroplastgenomesequenceofehretiadicksoniihanceehretiaceae
AT xiachongli completechloroplastgenomesequenceofehretiadicksoniihanceehretiaceae

Ejemplares similares