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An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis
Hepatocellular carcinoma (HCC) is one of the most common cancers in the world and is often associated with a poor prognosis. The main reason for this poor prognosis is that inconspicuous early symptoms lead to delayed diagnosis. Treatment options for advanced HCC remain limited and ineffective. In t...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9037256/ https://www.ncbi.nlm.nih.gov/pubmed/35413690 http://dx.doi.org/10.18632/aging.204012 |
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author | Xie, Jiaheng Chen, Liang Sun, Qingmei Li, Haobo Wei, Wei Wu, Dan Hu, Yiming Zhu, Zhechen Shi, Jingping Wang, Ming |
author_facet | Xie, Jiaheng Chen, Liang Sun, Qingmei Li, Haobo Wei, Wei Wu, Dan Hu, Yiming Zhu, Zhechen Shi, Jingping Wang, Ming |
author_sort | Xie, Jiaheng |
collection | PubMed |
description | Hepatocellular carcinoma (HCC) is one of the most common cancers in the world and is often associated with a poor prognosis. The main reason for this poor prognosis is that inconspicuous early symptoms lead to delayed diagnosis. Treatment options for advanced HCC remain limited and ineffective. In this context, the exploration of the immune microenvironment in HCC becomes attractive. In this study, we divided HCC into immune cell and non-immune cell subtypes, by single-cell sequencing analysis of GEO dataset GSE146115. We found differentially expressed genes in the two subtypes, which we used to construct a prognostic model for HCC through Cox and Lasso regressions. Our prognostic model can accurately evaluate the prognosis of HCC patients, and provide a reference for the design of immunotherapy for HCC. |
format | Online Article Text |
id | pubmed-9037256 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-90372562022-04-26 An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis Xie, Jiaheng Chen, Liang Sun, Qingmei Li, Haobo Wei, Wei Wu, Dan Hu, Yiming Zhu, Zhechen Shi, Jingping Wang, Ming Aging (Albany NY) Research Paper Hepatocellular carcinoma (HCC) is one of the most common cancers in the world and is often associated with a poor prognosis. The main reason for this poor prognosis is that inconspicuous early symptoms lead to delayed diagnosis. Treatment options for advanced HCC remain limited and ineffective. In this context, the exploration of the immune microenvironment in HCC becomes attractive. In this study, we divided HCC into immune cell and non-immune cell subtypes, by single-cell sequencing analysis of GEO dataset GSE146115. We found differentially expressed genes in the two subtypes, which we used to construct a prognostic model for HCC through Cox and Lasso regressions. Our prognostic model can accurately evaluate the prognosis of HCC patients, and provide a reference for the design of immunotherapy for HCC. Impact Journals 2022-04-12 /pmc/articles/PMC9037256/ /pubmed/35413690 http://dx.doi.org/10.18632/aging.204012 Text en Copyright: © 2022 Xie et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Xie, Jiaheng Chen, Liang Sun, Qingmei Li, Haobo Wei, Wei Wu, Dan Hu, Yiming Zhu, Zhechen Shi, Jingping Wang, Ming An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis |
title | An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis |
title_full | An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis |
title_fullStr | An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis |
title_full_unstemmed | An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis |
title_short | An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis |
title_sort | immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9037256/ https://www.ncbi.nlm.nih.gov/pubmed/35413690 http://dx.doi.org/10.18632/aging.204012 |
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