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An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis

Hepatocellular carcinoma (HCC) is one of the most common cancers in the world and is often associated with a poor prognosis. The main reason for this poor prognosis is that inconspicuous early symptoms lead to delayed diagnosis. Treatment options for advanced HCC remain limited and ineffective. In t...

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Autores principales: Xie, Jiaheng, Chen, Liang, Sun, Qingmei, Li, Haobo, Wei, Wei, Wu, Dan, Hu, Yiming, Zhu, Zhechen, Shi, Jingping, Wang, Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9037256/
https://www.ncbi.nlm.nih.gov/pubmed/35413690
http://dx.doi.org/10.18632/aging.204012
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author Xie, Jiaheng
Chen, Liang
Sun, Qingmei
Li, Haobo
Wei, Wei
Wu, Dan
Hu, Yiming
Zhu, Zhechen
Shi, Jingping
Wang, Ming
author_facet Xie, Jiaheng
Chen, Liang
Sun, Qingmei
Li, Haobo
Wei, Wei
Wu, Dan
Hu, Yiming
Zhu, Zhechen
Shi, Jingping
Wang, Ming
author_sort Xie, Jiaheng
collection PubMed
description Hepatocellular carcinoma (HCC) is one of the most common cancers in the world and is often associated with a poor prognosis. The main reason for this poor prognosis is that inconspicuous early symptoms lead to delayed diagnosis. Treatment options for advanced HCC remain limited and ineffective. In this context, the exploration of the immune microenvironment in HCC becomes attractive. In this study, we divided HCC into immune cell and non-immune cell subtypes, by single-cell sequencing analysis of GEO dataset GSE146115. We found differentially expressed genes in the two subtypes, which we used to construct a prognostic model for HCC through Cox and Lasso regressions. Our prognostic model can accurately evaluate the prognosis of HCC patients, and provide a reference for the design of immunotherapy for HCC.
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spelling pubmed-90372562022-04-26 An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis Xie, Jiaheng Chen, Liang Sun, Qingmei Li, Haobo Wei, Wei Wu, Dan Hu, Yiming Zhu, Zhechen Shi, Jingping Wang, Ming Aging (Albany NY) Research Paper Hepatocellular carcinoma (HCC) is one of the most common cancers in the world and is often associated with a poor prognosis. The main reason for this poor prognosis is that inconspicuous early symptoms lead to delayed diagnosis. Treatment options for advanced HCC remain limited and ineffective. In this context, the exploration of the immune microenvironment in HCC becomes attractive. In this study, we divided HCC into immune cell and non-immune cell subtypes, by single-cell sequencing analysis of GEO dataset GSE146115. We found differentially expressed genes in the two subtypes, which we used to construct a prognostic model for HCC through Cox and Lasso regressions. Our prognostic model can accurately evaluate the prognosis of HCC patients, and provide a reference for the design of immunotherapy for HCC. Impact Journals 2022-04-12 /pmc/articles/PMC9037256/ /pubmed/35413690 http://dx.doi.org/10.18632/aging.204012 Text en Copyright: © 2022 Xie et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Xie, Jiaheng
Chen, Liang
Sun, Qingmei
Li, Haobo
Wei, Wei
Wu, Dan
Hu, Yiming
Zhu, Zhechen
Shi, Jingping
Wang, Ming
An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis
title An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis
title_full An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis
title_fullStr An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis
title_full_unstemmed An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis
title_short An immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis
title_sort immune subtype-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing analysis
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9037256/
https://www.ncbi.nlm.nih.gov/pubmed/35413690
http://dx.doi.org/10.18632/aging.204012
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