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Intratumoral T-cell repertoires in DNA mismatch repair-proficient and -deficient colon tumors containing high or low numbers of tumor-infiltrating lymphocytes

Colon tumors with deficient DNA mismatch repair (dMMR) are generally infiltrated by T cells more densely than tumors with proficient mismatch repair (pMMR). However, high numbers of tumor-infiltrating lymphocytes (TILs) are found in select pMMR tumors, and low numbers of TILs are seen in select dMMR...

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Autores principales: Kim, Jin K., Chen, Chin-Tung, Keshinro, Ajaratu, Khan, Asama, Firat, Canan, Vanderbilt, Chad, Segal, Neil, Stadler, Zsofia, Shia, Jinru, Balachandran, Vinod P., Weiser, Martin R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9037499/
https://www.ncbi.nlm.nih.gov/pubmed/35481287
http://dx.doi.org/10.1080/2162402X.2022.2054757
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author Kim, Jin K.
Chen, Chin-Tung
Keshinro, Ajaratu
Khan, Asama
Firat, Canan
Vanderbilt, Chad
Segal, Neil
Stadler, Zsofia
Shia, Jinru
Balachandran, Vinod P.
Weiser, Martin R.
author_facet Kim, Jin K.
Chen, Chin-Tung
Keshinro, Ajaratu
Khan, Asama
Firat, Canan
Vanderbilt, Chad
Segal, Neil
Stadler, Zsofia
Shia, Jinru
Balachandran, Vinod P.
Weiser, Martin R.
author_sort Kim, Jin K.
collection PubMed
description Colon tumors with deficient DNA mismatch repair (dMMR) are generally infiltrated by T cells more densely than tumors with proficient mismatch repair (pMMR). However, high numbers of tumor-infiltrating lymphocytes (TILs) are found in select pMMR tumors, and low numbers of TILs are seen in select dMMR tumors. In this study, we compared T-cell repertoires in 20 pMMR and 27 dMMR colon tumors with high and low TIL counts. We found that T cells in dMMR tumors are more clonal and their repertoire is less rich compared with T cells in pMMR tumors. In the dMMR group, T cells in TIL-high tumors were more clonal and their repertoire was less rich compared with T cells in TIL-low tumors, but in the pMMR group, T-cell diversity in TIL-high tumors was comparable to T-cell diversity in TIL-low tumors. These findings suggest that T cells clonally expand in dMMR tumors, possibly in response to MMR deficiency-induced tumor neoantigens.
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spelling pubmed-90374992022-04-26 Intratumoral T-cell repertoires in DNA mismatch repair-proficient and -deficient colon tumors containing high or low numbers of tumor-infiltrating lymphocytes Kim, Jin K. Chen, Chin-Tung Keshinro, Ajaratu Khan, Asama Firat, Canan Vanderbilt, Chad Segal, Neil Stadler, Zsofia Shia, Jinru Balachandran, Vinod P. Weiser, Martin R. Oncoimmunology Original Research Colon tumors with deficient DNA mismatch repair (dMMR) are generally infiltrated by T cells more densely than tumors with proficient mismatch repair (pMMR). However, high numbers of tumor-infiltrating lymphocytes (TILs) are found in select pMMR tumors, and low numbers of TILs are seen in select dMMR tumors. In this study, we compared T-cell repertoires in 20 pMMR and 27 dMMR colon tumors with high and low TIL counts. We found that T cells in dMMR tumors are more clonal and their repertoire is less rich compared with T cells in pMMR tumors. In the dMMR group, T cells in TIL-high tumors were more clonal and their repertoire was less rich compared with T cells in TIL-low tumors, but in the pMMR group, T-cell diversity in TIL-high tumors was comparable to T-cell diversity in TIL-low tumors. These findings suggest that T cells clonally expand in dMMR tumors, possibly in response to MMR deficiency-induced tumor neoantigens. Taylor & Francis 2022-04-14 /pmc/articles/PMC9037499/ /pubmed/35481287 http://dx.doi.org/10.1080/2162402X.2022.2054757 Text en © 2022 The Author(s). Published with license by Taylor & Francis Group, LLC. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Kim, Jin K.
Chen, Chin-Tung
Keshinro, Ajaratu
Khan, Asama
Firat, Canan
Vanderbilt, Chad
Segal, Neil
Stadler, Zsofia
Shia, Jinru
Balachandran, Vinod P.
Weiser, Martin R.
Intratumoral T-cell repertoires in DNA mismatch repair-proficient and -deficient colon tumors containing high or low numbers of tumor-infiltrating lymphocytes
title Intratumoral T-cell repertoires in DNA mismatch repair-proficient and -deficient colon tumors containing high or low numbers of tumor-infiltrating lymphocytes
title_full Intratumoral T-cell repertoires in DNA mismatch repair-proficient and -deficient colon tumors containing high or low numbers of tumor-infiltrating lymphocytes
title_fullStr Intratumoral T-cell repertoires in DNA mismatch repair-proficient and -deficient colon tumors containing high or low numbers of tumor-infiltrating lymphocytes
title_full_unstemmed Intratumoral T-cell repertoires in DNA mismatch repair-proficient and -deficient colon tumors containing high or low numbers of tumor-infiltrating lymphocytes
title_short Intratumoral T-cell repertoires in DNA mismatch repair-proficient and -deficient colon tumors containing high or low numbers of tumor-infiltrating lymphocytes
title_sort intratumoral t-cell repertoires in dna mismatch repair-proficient and -deficient colon tumors containing high or low numbers of tumor-infiltrating lymphocytes
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9037499/
https://www.ncbi.nlm.nih.gov/pubmed/35481287
http://dx.doi.org/10.1080/2162402X.2022.2054757
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