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Recent advances in biological nanopores for nanopore sequencing, sensing and comparison of functional variations in MspA mutants

Biological nanopores are revolutionizing human health by the great myriad of detection and diagnostic skills. Their nano-confined area and ingenious shape are suitable to investigate a diverse range of molecules that were difficult to identify with the previous techniques. Additionally, high through...

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Autores principales: Bhatti, Huma, Jawed, Rohil, Ali, Irshad, Iqbal, Khurshid, Han, Yan, Lu, Zuhong, Liu, Quanjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9038099/
https://www.ncbi.nlm.nih.gov/pubmed/35478559
http://dx.doi.org/10.1039/d1ra02364k
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author Bhatti, Huma
Jawed, Rohil
Ali, Irshad
Iqbal, Khurshid
Han, Yan
Lu, Zuhong
Liu, Quanjun
author_facet Bhatti, Huma
Jawed, Rohil
Ali, Irshad
Iqbal, Khurshid
Han, Yan
Lu, Zuhong
Liu, Quanjun
author_sort Bhatti, Huma
collection PubMed
description Biological nanopores are revolutionizing human health by the great myriad of detection and diagnostic skills. Their nano-confined area and ingenious shape are suitable to investigate a diverse range of molecules that were difficult to identify with the previous techniques. Additionally, high throughput and label-free detection of target analytes instigated the exploration of new bacterial channel proteins such as Fragaceatoxin C (FraC), Cytolysin A (ClyA), Ferric hydroxamate uptake component A (FhuA) and Curli specific gene G (CsgG) along with the former ones, like α-hemolysin (αHL), Mycobacterium smegmatis porin A (MspA), aerolysin, bacteriophage phi 29 and Outer membrane porin G (OmpG). Herein, we discuss some well-known biological nanopores but emphasize on MspA and compare the effects of site-directed mutagenesis on the detection ability of its mutants in view of the surface charge distribution, voltage threshold and pore–analyte interaction. We also discuss illustrious and latest advances in biological nanopores for past 2–3 years due to limited space. Last but not the least, we elucidate our perspective for selecting a biological nanopore and propose some future directions to design a customized nanopore that would be suitable for DNA sequencing and sensing of other nontrivial molecules in question.
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spelling pubmed-90380992022-04-26 Recent advances in biological nanopores for nanopore sequencing, sensing and comparison of functional variations in MspA mutants Bhatti, Huma Jawed, Rohil Ali, Irshad Iqbal, Khurshid Han, Yan Lu, Zuhong Liu, Quanjun RSC Adv Chemistry Biological nanopores are revolutionizing human health by the great myriad of detection and diagnostic skills. Their nano-confined area and ingenious shape are suitable to investigate a diverse range of molecules that were difficult to identify with the previous techniques. Additionally, high throughput and label-free detection of target analytes instigated the exploration of new bacterial channel proteins such as Fragaceatoxin C (FraC), Cytolysin A (ClyA), Ferric hydroxamate uptake component A (FhuA) and Curli specific gene G (CsgG) along with the former ones, like α-hemolysin (αHL), Mycobacterium smegmatis porin A (MspA), aerolysin, bacteriophage phi 29 and Outer membrane porin G (OmpG). Herein, we discuss some well-known biological nanopores but emphasize on MspA and compare the effects of site-directed mutagenesis on the detection ability of its mutants in view of the surface charge distribution, voltage threshold and pore–analyte interaction. We also discuss illustrious and latest advances in biological nanopores for past 2–3 years due to limited space. Last but not the least, we elucidate our perspective for selecting a biological nanopore and propose some future directions to design a customized nanopore that would be suitable for DNA sequencing and sensing of other nontrivial molecules in question. The Royal Society of Chemistry 2021-08-31 /pmc/articles/PMC9038099/ /pubmed/35478559 http://dx.doi.org/10.1039/d1ra02364k Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Bhatti, Huma
Jawed, Rohil
Ali, Irshad
Iqbal, Khurshid
Han, Yan
Lu, Zuhong
Liu, Quanjun
Recent advances in biological nanopores for nanopore sequencing, sensing and comparison of functional variations in MspA mutants
title Recent advances in biological nanopores for nanopore sequencing, sensing and comparison of functional variations in MspA mutants
title_full Recent advances in biological nanopores for nanopore sequencing, sensing and comparison of functional variations in MspA mutants
title_fullStr Recent advances in biological nanopores for nanopore sequencing, sensing and comparison of functional variations in MspA mutants
title_full_unstemmed Recent advances in biological nanopores for nanopore sequencing, sensing and comparison of functional variations in MspA mutants
title_short Recent advances in biological nanopores for nanopore sequencing, sensing and comparison of functional variations in MspA mutants
title_sort recent advances in biological nanopores for nanopore sequencing, sensing and comparison of functional variations in mspa mutants
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9038099/
https://www.ncbi.nlm.nih.gov/pubmed/35478559
http://dx.doi.org/10.1039/d1ra02364k
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