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Automated segmentation of the fractured vertebrae on CT and its applicability in a radiomics model to predict fracture malignancy
Although CT radiomics has shown promising results in the evaluation of vertebral fractures, the need for manual segmentation of fractured vertebrae limited the routine clinical implementation of radiomics. Therefore, automated segmentation of fractured vertebrae is needed for successful clinical use...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9038736/ https://www.ncbi.nlm.nih.gov/pubmed/35468985 http://dx.doi.org/10.1038/s41598-022-10807-7 |
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author | Park, Taeyong Yoon, Min A Cho, Young Chul Ham, Su Jung Ko, Yousun Kim, Sehee Jeong, Heeryeol Lee, Jeongjin |
author_facet | Park, Taeyong Yoon, Min A Cho, Young Chul Ham, Su Jung Ko, Yousun Kim, Sehee Jeong, Heeryeol Lee, Jeongjin |
author_sort | Park, Taeyong |
collection | PubMed |
description | Although CT radiomics has shown promising results in the evaluation of vertebral fractures, the need for manual segmentation of fractured vertebrae limited the routine clinical implementation of radiomics. Therefore, automated segmentation of fractured vertebrae is needed for successful clinical use of radiomics. In this study, we aimed to develop and validate an automated algorithm for segmentation of fractured vertebral bodies on CT, and to evaluate the applicability of the algorithm in a radiomics prediction model to differentiate benign and malignant fractures. A convolutional neural network was trained to perform automated segmentation of fractured vertebral bodies using 341 vertebrae with benign or malignant fractures from 158 patients, and was validated on independent test sets (internal test, 86 vertebrae [59 patients]; external test, 102 vertebrae [59 patients]). Then, a radiomics model predicting fracture malignancy on CT was constructed, and the prediction performance was compared between automated and human expert segmentations. The algorithm achieved good agreement with human expert segmentation at testing (Dice similarity coefficient, 0.93–0.94; cross-sectional area error, 2.66–2.97%; average surface distance, 0.40–0.54 mm). The radiomics model demonstrated good performance in the training set (AUC, 0.93). In the test sets, automated and human expert segmentations showed comparable prediction performances (AUC, internal test, 0.80 vs 0.87, p = 0.044; external test, 0.83 vs 0.80, p = 0.37). In summary, we developed and validated an automated segmentation algorithm that showed comparable performance to human expert segmentation in a CT radiomics model to predict fracture malignancy, which may enable more practical clinical utilization of radiomics. |
format | Online Article Text |
id | pubmed-9038736 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-90387362022-04-27 Automated segmentation of the fractured vertebrae on CT and its applicability in a radiomics model to predict fracture malignancy Park, Taeyong Yoon, Min A Cho, Young Chul Ham, Su Jung Ko, Yousun Kim, Sehee Jeong, Heeryeol Lee, Jeongjin Sci Rep Article Although CT radiomics has shown promising results in the evaluation of vertebral fractures, the need for manual segmentation of fractured vertebrae limited the routine clinical implementation of radiomics. Therefore, automated segmentation of fractured vertebrae is needed for successful clinical use of radiomics. In this study, we aimed to develop and validate an automated algorithm for segmentation of fractured vertebral bodies on CT, and to evaluate the applicability of the algorithm in a radiomics prediction model to differentiate benign and malignant fractures. A convolutional neural network was trained to perform automated segmentation of fractured vertebral bodies using 341 vertebrae with benign or malignant fractures from 158 patients, and was validated on independent test sets (internal test, 86 vertebrae [59 patients]; external test, 102 vertebrae [59 patients]). Then, a radiomics model predicting fracture malignancy on CT was constructed, and the prediction performance was compared between automated and human expert segmentations. The algorithm achieved good agreement with human expert segmentation at testing (Dice similarity coefficient, 0.93–0.94; cross-sectional area error, 2.66–2.97%; average surface distance, 0.40–0.54 mm). The radiomics model demonstrated good performance in the training set (AUC, 0.93). In the test sets, automated and human expert segmentations showed comparable prediction performances (AUC, internal test, 0.80 vs 0.87, p = 0.044; external test, 0.83 vs 0.80, p = 0.37). In summary, we developed and validated an automated segmentation algorithm that showed comparable performance to human expert segmentation in a CT radiomics model to predict fracture malignancy, which may enable more practical clinical utilization of radiomics. Nature Publishing Group UK 2022-04-25 /pmc/articles/PMC9038736/ /pubmed/35468985 http://dx.doi.org/10.1038/s41598-022-10807-7 Text en © The Author(s) 2022, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Park, Taeyong Yoon, Min A Cho, Young Chul Ham, Su Jung Ko, Yousun Kim, Sehee Jeong, Heeryeol Lee, Jeongjin Automated segmentation of the fractured vertebrae on CT and its applicability in a radiomics model to predict fracture malignancy |
title | Automated segmentation of the fractured vertebrae on CT and its applicability in a radiomics model to predict fracture malignancy |
title_full | Automated segmentation of the fractured vertebrae on CT and its applicability in a radiomics model to predict fracture malignancy |
title_fullStr | Automated segmentation of the fractured vertebrae on CT and its applicability in a radiomics model to predict fracture malignancy |
title_full_unstemmed | Automated segmentation of the fractured vertebrae on CT and its applicability in a radiomics model to predict fracture malignancy |
title_short | Automated segmentation of the fractured vertebrae on CT and its applicability in a radiomics model to predict fracture malignancy |
title_sort | automated segmentation of the fractured vertebrae on ct and its applicability in a radiomics model to predict fracture malignancy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9038736/ https://www.ncbi.nlm.nih.gov/pubmed/35468985 http://dx.doi.org/10.1038/s41598-022-10807-7 |
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