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A novel gyrovirus in a common pheasant (Phasianus colchicus) with poult enteritis and mortality syndrome
A novel gyrovirus was detected in an intestinal specimen of a common pheasant that died due to poult enteritis and mortality syndrome. The genome of the pheasant-associated gyrovirus (PAGyV) is 2353 nucleotides (nt) long and contains putative genes for the VP1, VP2, and VP3 proteins in an arrangemen...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Vienna
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9038835/ https://www.ncbi.nlm.nih.gov/pubmed/35306591 http://dx.doi.org/10.1007/s00705-022-05417-7 |
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author | Fehér, Enikő Bali, Krisztina Kaszab, Eszter Ihász, Katalin Jakab, Szilvia Nagy, Borbála Ursu, Krisztina Farkas, Szilvia L. Bányai, Krisztián |
author_facet | Fehér, Enikő Bali, Krisztina Kaszab, Eszter Ihász, Katalin Jakab, Szilvia Nagy, Borbála Ursu, Krisztina Farkas, Szilvia L. Bányai, Krisztián |
author_sort | Fehér, Enikő |
collection | PubMed |
description | A novel gyrovirus was detected in an intestinal specimen of a common pheasant that died due to poult enteritis and mortality syndrome. The genome of the pheasant-associated gyrovirus (PAGyV) is 2353 nucleotides (nt) long and contains putative genes for the VP1, VP2, and VP3 proteins in an arrangement that is typical for gyroviruses. Gyrovirus-specific motifs were identified in both the coding region and the intergenic region of the PAGyV genome. The VP1 of PAGyV shares up to 67.6% pairwise nt sequence identity with reference sequences and forms a distinct branch in the phylogenetic tree. Thus, according to the recently described species demarcation criteria, PAGyV belongs to a novel species in the genus Gyrovirus, family Anelloviridae, for which we propose the name "Gyrovirus phaco 1". |
format | Online Article Text |
id | pubmed-9038835 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Vienna |
record_format | MEDLINE/PubMed |
spelling | pubmed-90388352022-05-07 A novel gyrovirus in a common pheasant (Phasianus colchicus) with poult enteritis and mortality syndrome Fehér, Enikő Bali, Krisztina Kaszab, Eszter Ihász, Katalin Jakab, Szilvia Nagy, Borbála Ursu, Krisztina Farkas, Szilvia L. Bányai, Krisztián Arch Virol Annotated Sequence Record A novel gyrovirus was detected in an intestinal specimen of a common pheasant that died due to poult enteritis and mortality syndrome. The genome of the pheasant-associated gyrovirus (PAGyV) is 2353 nucleotides (nt) long and contains putative genes for the VP1, VP2, and VP3 proteins in an arrangement that is typical for gyroviruses. Gyrovirus-specific motifs were identified in both the coding region and the intergenic region of the PAGyV genome. The VP1 of PAGyV shares up to 67.6% pairwise nt sequence identity with reference sequences and forms a distinct branch in the phylogenetic tree. Thus, according to the recently described species demarcation criteria, PAGyV belongs to a novel species in the genus Gyrovirus, family Anelloviridae, for which we propose the name "Gyrovirus phaco 1". Springer Vienna 2022-03-20 2022 /pmc/articles/PMC9038835/ /pubmed/35306591 http://dx.doi.org/10.1007/s00705-022-05417-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Annotated Sequence Record Fehér, Enikő Bali, Krisztina Kaszab, Eszter Ihász, Katalin Jakab, Szilvia Nagy, Borbála Ursu, Krisztina Farkas, Szilvia L. Bányai, Krisztián A novel gyrovirus in a common pheasant (Phasianus colchicus) with poult enteritis and mortality syndrome |
title | A novel gyrovirus in a common pheasant (Phasianus colchicus) with poult enteritis and mortality syndrome |
title_full | A novel gyrovirus in a common pheasant (Phasianus colchicus) with poult enteritis and mortality syndrome |
title_fullStr | A novel gyrovirus in a common pheasant (Phasianus colchicus) with poult enteritis and mortality syndrome |
title_full_unstemmed | A novel gyrovirus in a common pheasant (Phasianus colchicus) with poult enteritis and mortality syndrome |
title_short | A novel gyrovirus in a common pheasant (Phasianus colchicus) with poult enteritis and mortality syndrome |
title_sort | novel gyrovirus in a common pheasant (phasianus colchicus) with poult enteritis and mortality syndrome |
topic | Annotated Sequence Record |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9038835/ https://www.ncbi.nlm.nih.gov/pubmed/35306591 http://dx.doi.org/10.1007/s00705-022-05417-7 |
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