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Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease

An array of carbon nanotube (CNT)-based sensors was produced for sensing selective biomarkers and evaluating breathomics applications with the aid of clustering and classification algorithms. We assessed the sensor array performance in identifying target volatiles and we explored the combination of...

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Autores principales: Drera, Giovanni, Freddi, Sonia, Emelianov, Aleksei V., Bobrinetskiy, Ivan I., Chiesa, Maria, Zanotti, Michele, Pagliara, Stefania, Fedorov, Fedor S., Nasibulin, Albert G., Montuschi, Paolo, Sangaletti, Luigi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9041100/
https://www.ncbi.nlm.nih.gov/pubmed/35480252
http://dx.doi.org/10.1039/d1ra03337a
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author Drera, Giovanni
Freddi, Sonia
Emelianov, Aleksei V.
Bobrinetskiy, Ivan I.
Chiesa, Maria
Zanotti, Michele
Pagliara, Stefania
Fedorov, Fedor S.
Nasibulin, Albert G.
Montuschi, Paolo
Sangaletti, Luigi
author_facet Drera, Giovanni
Freddi, Sonia
Emelianov, Aleksei V.
Bobrinetskiy, Ivan I.
Chiesa, Maria
Zanotti, Michele
Pagliara, Stefania
Fedorov, Fedor S.
Nasibulin, Albert G.
Montuschi, Paolo
Sangaletti, Luigi
author_sort Drera, Giovanni
collection PubMed
description An array of carbon nanotube (CNT)-based sensors was produced for sensing selective biomarkers and evaluating breathomics applications with the aid of clustering and classification algorithms. We assessed the sensor array performance in identifying target volatiles and we explored the combination of various classification algorithms to analyse the results obtained from a limited dataset of exhaled breath samples. The sensor array was exposed to ammonia (NH(3)), nitrogen dioxide (NO(2)), hydrogen sulphide (H(2)S), and benzene (C(6)H(6)). Among them, ammonia (NH(3)) and nitrogen dioxide (NO(2)) are known biomarkers of chronic obstructive pulmonary disease (COPD). Calibration curves for individual sensors in the array were obtained following exposure to the four target molecules. A remarkable response to ammonia (NH(3)) and nitrogen dioxide (NO(2)), according to benchmarking with available data in the literature, was observed. Sensor array responses were analyzed through principal component analysis (PCA), thus assessing the array selectivity and its capability to discriminate the four different target volatile molecules. The sensor array was then exposed to exhaled breath samples from patients affected by COPD and healthy control volunteers. A combination of PCA, supported vector machine (SVM), and linear discrimination analysis (LDA) shows that the sensor array can be trained to accurately discriminate healthy from COPD subjects, in spite of the limited dataset.
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spelling pubmed-90411002022-04-26 Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease Drera, Giovanni Freddi, Sonia Emelianov, Aleksei V. Bobrinetskiy, Ivan I. Chiesa, Maria Zanotti, Michele Pagliara, Stefania Fedorov, Fedor S. Nasibulin, Albert G. Montuschi, Paolo Sangaletti, Luigi RSC Adv Chemistry An array of carbon nanotube (CNT)-based sensors was produced for sensing selective biomarkers and evaluating breathomics applications with the aid of clustering and classification algorithms. We assessed the sensor array performance in identifying target volatiles and we explored the combination of various classification algorithms to analyse the results obtained from a limited dataset of exhaled breath samples. The sensor array was exposed to ammonia (NH(3)), nitrogen dioxide (NO(2)), hydrogen sulphide (H(2)S), and benzene (C(6)H(6)). Among them, ammonia (NH(3)) and nitrogen dioxide (NO(2)) are known biomarkers of chronic obstructive pulmonary disease (COPD). Calibration curves for individual sensors in the array were obtained following exposure to the four target molecules. A remarkable response to ammonia (NH(3)) and nitrogen dioxide (NO(2)), according to benchmarking with available data in the literature, was observed. Sensor array responses were analyzed through principal component analysis (PCA), thus assessing the array selectivity and its capability to discriminate the four different target volatile molecules. The sensor array was then exposed to exhaled breath samples from patients affected by COPD and healthy control volunteers. A combination of PCA, supported vector machine (SVM), and linear discrimination analysis (LDA) shows that the sensor array can be trained to accurately discriminate healthy from COPD subjects, in spite of the limited dataset. The Royal Society of Chemistry 2021-09-10 /pmc/articles/PMC9041100/ /pubmed/35480252 http://dx.doi.org/10.1039/d1ra03337a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Drera, Giovanni
Freddi, Sonia
Emelianov, Aleksei V.
Bobrinetskiy, Ivan I.
Chiesa, Maria
Zanotti, Michele
Pagliara, Stefania
Fedorov, Fedor S.
Nasibulin, Albert G.
Montuschi, Paolo
Sangaletti, Luigi
Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease
title Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease
title_full Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease
title_fullStr Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease
title_full_unstemmed Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease
title_short Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease
title_sort exploring the performance of a functionalized cnt-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9041100/
https://www.ncbi.nlm.nih.gov/pubmed/35480252
http://dx.doi.org/10.1039/d1ra03337a
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