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Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease
An array of carbon nanotube (CNT)-based sensors was produced for sensing selective biomarkers and evaluating breathomics applications with the aid of clustering and classification algorithms. We assessed the sensor array performance in identifying target volatiles and we explored the combination of...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9041100/ https://www.ncbi.nlm.nih.gov/pubmed/35480252 http://dx.doi.org/10.1039/d1ra03337a |
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author | Drera, Giovanni Freddi, Sonia Emelianov, Aleksei V. Bobrinetskiy, Ivan I. Chiesa, Maria Zanotti, Michele Pagliara, Stefania Fedorov, Fedor S. Nasibulin, Albert G. Montuschi, Paolo Sangaletti, Luigi |
author_facet | Drera, Giovanni Freddi, Sonia Emelianov, Aleksei V. Bobrinetskiy, Ivan I. Chiesa, Maria Zanotti, Michele Pagliara, Stefania Fedorov, Fedor S. Nasibulin, Albert G. Montuschi, Paolo Sangaletti, Luigi |
author_sort | Drera, Giovanni |
collection | PubMed |
description | An array of carbon nanotube (CNT)-based sensors was produced for sensing selective biomarkers and evaluating breathomics applications with the aid of clustering and classification algorithms. We assessed the sensor array performance in identifying target volatiles and we explored the combination of various classification algorithms to analyse the results obtained from a limited dataset of exhaled breath samples. The sensor array was exposed to ammonia (NH(3)), nitrogen dioxide (NO(2)), hydrogen sulphide (H(2)S), and benzene (C(6)H(6)). Among them, ammonia (NH(3)) and nitrogen dioxide (NO(2)) are known biomarkers of chronic obstructive pulmonary disease (COPD). Calibration curves for individual sensors in the array were obtained following exposure to the four target molecules. A remarkable response to ammonia (NH(3)) and nitrogen dioxide (NO(2)), according to benchmarking with available data in the literature, was observed. Sensor array responses were analyzed through principal component analysis (PCA), thus assessing the array selectivity and its capability to discriminate the four different target volatile molecules. The sensor array was then exposed to exhaled breath samples from patients affected by COPD and healthy control volunteers. A combination of PCA, supported vector machine (SVM), and linear discrimination analysis (LDA) shows that the sensor array can be trained to accurately discriminate healthy from COPD subjects, in spite of the limited dataset. |
format | Online Article Text |
id | pubmed-9041100 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-90411002022-04-26 Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease Drera, Giovanni Freddi, Sonia Emelianov, Aleksei V. Bobrinetskiy, Ivan I. Chiesa, Maria Zanotti, Michele Pagliara, Stefania Fedorov, Fedor S. Nasibulin, Albert G. Montuschi, Paolo Sangaletti, Luigi RSC Adv Chemistry An array of carbon nanotube (CNT)-based sensors was produced for sensing selective biomarkers and evaluating breathomics applications with the aid of clustering and classification algorithms. We assessed the sensor array performance in identifying target volatiles and we explored the combination of various classification algorithms to analyse the results obtained from a limited dataset of exhaled breath samples. The sensor array was exposed to ammonia (NH(3)), nitrogen dioxide (NO(2)), hydrogen sulphide (H(2)S), and benzene (C(6)H(6)). Among them, ammonia (NH(3)) and nitrogen dioxide (NO(2)) are known biomarkers of chronic obstructive pulmonary disease (COPD). Calibration curves for individual sensors in the array were obtained following exposure to the four target molecules. A remarkable response to ammonia (NH(3)) and nitrogen dioxide (NO(2)), according to benchmarking with available data in the literature, was observed. Sensor array responses were analyzed through principal component analysis (PCA), thus assessing the array selectivity and its capability to discriminate the four different target volatile molecules. The sensor array was then exposed to exhaled breath samples from patients affected by COPD and healthy control volunteers. A combination of PCA, supported vector machine (SVM), and linear discrimination analysis (LDA) shows that the sensor array can be trained to accurately discriminate healthy from COPD subjects, in spite of the limited dataset. The Royal Society of Chemistry 2021-09-10 /pmc/articles/PMC9041100/ /pubmed/35480252 http://dx.doi.org/10.1039/d1ra03337a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Drera, Giovanni Freddi, Sonia Emelianov, Aleksei V. Bobrinetskiy, Ivan I. Chiesa, Maria Zanotti, Michele Pagliara, Stefania Fedorov, Fedor S. Nasibulin, Albert G. Montuschi, Paolo Sangaletti, Luigi Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease |
title | Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease |
title_full | Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease |
title_fullStr | Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease |
title_full_unstemmed | Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease |
title_short | Exploring the performance of a functionalized CNT-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease |
title_sort | exploring the performance of a functionalized cnt-based sensor array for breathomics through clustering and classification algorithms: from gas sensing of selective biomarkers to discrimination of chronic obstructive pulmonary disease |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9041100/ https://www.ncbi.nlm.nih.gov/pubmed/35480252 http://dx.doi.org/10.1039/d1ra03337a |
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