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Deep learning-based image processing in optical microscopy

Optical microscopy has emerged as a key driver of fundamental research since it provides the ability to probe into imperceptible structures in the biomedical world. For the detailed investigation of samples, a high-resolution image with enhanced contrast and minimal damage is preferred. To achieve t...

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Autores principales: Melanthota, Sindhoora Kaniyala, Gopal, Dharshini, Chakrabarti, Shweta, Kashyap, Anirudh Ameya, Radhakrishnan, Raghu, Mazumder, Nirmal
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9043085/
https://www.ncbi.nlm.nih.gov/pubmed/35528030
http://dx.doi.org/10.1007/s12551-022-00949-3
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author Melanthota, Sindhoora Kaniyala
Gopal, Dharshini
Chakrabarti, Shweta
Kashyap, Anirudh Ameya
Radhakrishnan, Raghu
Mazumder, Nirmal
author_facet Melanthota, Sindhoora Kaniyala
Gopal, Dharshini
Chakrabarti, Shweta
Kashyap, Anirudh Ameya
Radhakrishnan, Raghu
Mazumder, Nirmal
author_sort Melanthota, Sindhoora Kaniyala
collection PubMed
description Optical microscopy has emerged as a key driver of fundamental research since it provides the ability to probe into imperceptible structures in the biomedical world. For the detailed investigation of samples, a high-resolution image with enhanced contrast and minimal damage is preferred. To achieve this, an automated image analysis method is preferable over manual analysis in terms of both speed of acquisition and reduced error accumulation. In this regard, deep learning (DL)-based image processing can be highly beneficial. The review summarises and critiques the use of DL in image processing for the data collected using various optical microscopic techniques. In tandem with optical microscopy, DL has already found applications in various problems related to image classification and segmentation. It has also performed well in enhancing image resolution in smartphone-based microscopy, which in turn enablse crucial medical assistance in remote places. GRAPHICAL ABSTRACT: [Image: see text]
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spelling pubmed-90430852022-05-07 Deep learning-based image processing in optical microscopy Melanthota, Sindhoora Kaniyala Gopal, Dharshini Chakrabarti, Shweta Kashyap, Anirudh Ameya Radhakrishnan, Raghu Mazumder, Nirmal Biophys Rev Review Optical microscopy has emerged as a key driver of fundamental research since it provides the ability to probe into imperceptible structures in the biomedical world. For the detailed investigation of samples, a high-resolution image with enhanced contrast and minimal damage is preferred. To achieve this, an automated image analysis method is preferable over manual analysis in terms of both speed of acquisition and reduced error accumulation. In this regard, deep learning (DL)-based image processing can be highly beneficial. The review summarises and critiques the use of DL in image processing for the data collected using various optical microscopic techniques. In tandem with optical microscopy, DL has already found applications in various problems related to image classification and segmentation. It has also performed well in enhancing image resolution in smartphone-based microscopy, which in turn enablse crucial medical assistance in remote places. GRAPHICAL ABSTRACT: [Image: see text] Springer Berlin Heidelberg 2022-04-06 /pmc/articles/PMC9043085/ /pubmed/35528030 http://dx.doi.org/10.1007/s12551-022-00949-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Review
Melanthota, Sindhoora Kaniyala
Gopal, Dharshini
Chakrabarti, Shweta
Kashyap, Anirudh Ameya
Radhakrishnan, Raghu
Mazumder, Nirmal
Deep learning-based image processing in optical microscopy
title Deep learning-based image processing in optical microscopy
title_full Deep learning-based image processing in optical microscopy
title_fullStr Deep learning-based image processing in optical microscopy
title_full_unstemmed Deep learning-based image processing in optical microscopy
title_short Deep learning-based image processing in optical microscopy
title_sort deep learning-based image processing in optical microscopy
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9043085/
https://www.ncbi.nlm.nih.gov/pubmed/35528030
http://dx.doi.org/10.1007/s12551-022-00949-3
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