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Automated exploitation of the big configuration space of large adsorbates on transition metals reveals chemistry feasibility
Mechanistic understanding of large molecule conversion and the discovery of suitable heterogeneous catalysts have been lagging due to the combinatorial inventory of intermediates and the inability of humans to enumerate all structures. Here, we introduce an automated framework to predict stable conf...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9043206/ https://www.ncbi.nlm.nih.gov/pubmed/35474063 http://dx.doi.org/10.1038/s41467-022-29705-7 |
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author | Gu, Geun Ho Lee, Miriam Jung, Yousung Vlachos, Dionisios G. |
author_facet | Gu, Geun Ho Lee, Miriam Jung, Yousung Vlachos, Dionisios G. |
author_sort | Gu, Geun Ho |
collection | PubMed |
description | Mechanistic understanding of large molecule conversion and the discovery of suitable heterogeneous catalysts have been lagging due to the combinatorial inventory of intermediates and the inability of humans to enumerate all structures. Here, we introduce an automated framework to predict stable configurations on transition metal surfaces and demonstrate its validity for adsorbates with up to 6 carbon and oxygen atoms on 11 metals, enabling the exploration of ~10(8) potential configurations. It combines a graph enumeration platform, force field, multi-fidelity DFT calculations, and first-principles trained machine learning. Clusters in the data reveal groups of catalysts stabilizing different structures and expose selective catalysts for showcase transformations, such as the ethylene epoxidation on Ag and Cu and the lack of C-C scission chemistry on Au. Deviations from the commonly assumed atom valency rule of small adsorbates are also manifested. This library can be leveraged to identify catalysts for converting large molecules computationally. |
format | Online Article Text |
id | pubmed-9043206 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-90432062022-04-28 Automated exploitation of the big configuration space of large adsorbates on transition metals reveals chemistry feasibility Gu, Geun Ho Lee, Miriam Jung, Yousung Vlachos, Dionisios G. Nat Commun Article Mechanistic understanding of large molecule conversion and the discovery of suitable heterogeneous catalysts have been lagging due to the combinatorial inventory of intermediates and the inability of humans to enumerate all structures. Here, we introduce an automated framework to predict stable configurations on transition metal surfaces and demonstrate its validity for adsorbates with up to 6 carbon and oxygen atoms on 11 metals, enabling the exploration of ~10(8) potential configurations. It combines a graph enumeration platform, force field, multi-fidelity DFT calculations, and first-principles trained machine learning. Clusters in the data reveal groups of catalysts stabilizing different structures and expose selective catalysts for showcase transformations, such as the ethylene epoxidation on Ag and Cu and the lack of C-C scission chemistry on Au. Deviations from the commonly assumed atom valency rule of small adsorbates are also manifested. This library can be leveraged to identify catalysts for converting large molecules computationally. Nature Publishing Group UK 2022-04-26 /pmc/articles/PMC9043206/ /pubmed/35474063 http://dx.doi.org/10.1038/s41467-022-29705-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Gu, Geun Ho Lee, Miriam Jung, Yousung Vlachos, Dionisios G. Automated exploitation of the big configuration space of large adsorbates on transition metals reveals chemistry feasibility |
title | Automated exploitation of the big configuration space of large adsorbates on transition metals reveals chemistry feasibility |
title_full | Automated exploitation of the big configuration space of large adsorbates on transition metals reveals chemistry feasibility |
title_fullStr | Automated exploitation of the big configuration space of large adsorbates on transition metals reveals chemistry feasibility |
title_full_unstemmed | Automated exploitation of the big configuration space of large adsorbates on transition metals reveals chemistry feasibility |
title_short | Automated exploitation of the big configuration space of large adsorbates on transition metals reveals chemistry feasibility |
title_sort | automated exploitation of the big configuration space of large adsorbates on transition metals reveals chemistry feasibility |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9043206/ https://www.ncbi.nlm.nih.gov/pubmed/35474063 http://dx.doi.org/10.1038/s41467-022-29705-7 |
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