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Time-discrete SIR model for COVID-19 in Fiji

Using the data provided by Fiji's ministry of health and medical services, we apply an implicit time-discrete SIR (susceptible people–infectious people–removed people) model that tracks the transmission and recovering rate at time, t to predict the trend of the coronavirus disease 2019 (COVID-1...

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Autores principales: Singh, Rishal Amar, Lal, Rajnesh, Kotti, Ramanuja Rao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cambridge University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9043634/
https://www.ncbi.nlm.nih.gov/pubmed/35387697
http://dx.doi.org/10.1017/S0950268822000590
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author Singh, Rishal Amar
Lal, Rajnesh
Kotti, Ramanuja Rao
author_facet Singh, Rishal Amar
Lal, Rajnesh
Kotti, Ramanuja Rao
author_sort Singh, Rishal Amar
collection PubMed
description Using the data provided by Fiji's ministry of health and medical services, we apply an implicit time-discrete SIR (susceptible people–infectious people–removed people) model that tracks the transmission and recovering rate at time, t to predict the trend of the coronavirus disease 2019 (COVID-19) pandemic in Fiji. The model implied time-varying transmission and recovery rates were calculated from 4 May 2021 to 9 October 2021. The estimator functions for these rates were determined, and a short-term (30 days) forecast was done. The model was validated with observed values of the active and recovered cases from 11 October 2021 to 9 December 2021. Statistical results reveal a good fit of profiles between model simulated and the reported COVID-19 data. The gradual decrease of the time-varying basic reproduction number with values below one towards the end of the study period suggest the government's success in controlling the epidemic. The mean reproduction number for the second wave of COVID-19 in Fiji was estimated as 2.7818. The results from this study can be used by researchers, the Fijian government, and the relevant health policy makers in making informed decisions should a third COVID-19 wave occur.
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spelling pubmed-90436342022-04-28 Time-discrete SIR model for COVID-19 in Fiji Singh, Rishal Amar Lal, Rajnesh Kotti, Ramanuja Rao Epidemiol Infect Original Paper Using the data provided by Fiji's ministry of health and medical services, we apply an implicit time-discrete SIR (susceptible people–infectious people–removed people) model that tracks the transmission and recovering rate at time, t to predict the trend of the coronavirus disease 2019 (COVID-19) pandemic in Fiji. The model implied time-varying transmission and recovery rates were calculated from 4 May 2021 to 9 October 2021. The estimator functions for these rates were determined, and a short-term (30 days) forecast was done. The model was validated with observed values of the active and recovered cases from 11 October 2021 to 9 December 2021. Statistical results reveal a good fit of profiles between model simulated and the reported COVID-19 data. The gradual decrease of the time-varying basic reproduction number with values below one towards the end of the study period suggest the government's success in controlling the epidemic. The mean reproduction number for the second wave of COVID-19 in Fiji was estimated as 2.7818. The results from this study can be used by researchers, the Fijian government, and the relevant health policy makers in making informed decisions should a third COVID-19 wave occur. Cambridge University Press 2022-04-07 /pmc/articles/PMC9043634/ /pubmed/35387697 http://dx.doi.org/10.1017/S0950268822000590 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
spellingShingle Original Paper
Singh, Rishal Amar
Lal, Rajnesh
Kotti, Ramanuja Rao
Time-discrete SIR model for COVID-19 in Fiji
title Time-discrete SIR model for COVID-19 in Fiji
title_full Time-discrete SIR model for COVID-19 in Fiji
title_fullStr Time-discrete SIR model for COVID-19 in Fiji
title_full_unstemmed Time-discrete SIR model for COVID-19 in Fiji
title_short Time-discrete SIR model for COVID-19 in Fiji
title_sort time-discrete sir model for covid-19 in fiji
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9043634/
https://www.ncbi.nlm.nih.gov/pubmed/35387697
http://dx.doi.org/10.1017/S0950268822000590
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