Cargando…
Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes
Insulin signaling promotes anabolic metabolism to regulate cell growth through multi-omic interactions. To obtain a comprehensive view of the cellular responses to insulin, we constructed a trans-omic network of insulin action in Drosophila cells that involves the integration of multi-omic data sets...
Autores principales: | , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9044165/ https://www.ncbi.nlm.nih.gov/pubmed/35494245 http://dx.doi.org/10.1016/j.isci.2022.104231 |
_version_ | 1784695044575330304 |
---|---|
author | Terakawa, Akira Hu, Yanhui Kokaji, Toshiya Yugi, Katsuyuki Morita, Keigo Ohno, Satoshi Pan, Yifei Bai, Yunfan Parkhitko, Andrey A. Ni, Xiaochun Asara, John M. Bulyk, Martha L. Perrimon, Norbert Kuroda, Shinya |
author_facet | Terakawa, Akira Hu, Yanhui Kokaji, Toshiya Yugi, Katsuyuki Morita, Keigo Ohno, Satoshi Pan, Yifei Bai, Yunfan Parkhitko, Andrey A. Ni, Xiaochun Asara, John M. Bulyk, Martha L. Perrimon, Norbert Kuroda, Shinya |
author_sort | Terakawa, Akira |
collection | PubMed |
description | Insulin signaling promotes anabolic metabolism to regulate cell growth through multi-omic interactions. To obtain a comprehensive view of the cellular responses to insulin, we constructed a trans-omic network of insulin action in Drosophila cells that involves the integration of multi-omic data sets. In this network, 14 transcription factors, including Myc, coordinately upregulate the gene expression of anabolic processes such as nucleotide synthesis, transcription, and translation, consistent with decreases in metabolites such as nucleotide triphosphates and proteinogenic amino acids required for transcription and translation. Next, as cell growth is required for cell proliferation and insulin can stimulate proliferation in a context-dependent manner, we integrated the trans-omic network with results from a CRISPR functional screen for cell proliferation. This analysis validates the role of a Myc-mediated subnetwork that coordinates the activation of genes involved in anabolic processes required for cell growth. |
format | Online Article Text |
id | pubmed-9044165 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-90441652022-04-28 Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes Terakawa, Akira Hu, Yanhui Kokaji, Toshiya Yugi, Katsuyuki Morita, Keigo Ohno, Satoshi Pan, Yifei Bai, Yunfan Parkhitko, Andrey A. Ni, Xiaochun Asara, John M. Bulyk, Martha L. Perrimon, Norbert Kuroda, Shinya iScience Article Insulin signaling promotes anabolic metabolism to regulate cell growth through multi-omic interactions. To obtain a comprehensive view of the cellular responses to insulin, we constructed a trans-omic network of insulin action in Drosophila cells that involves the integration of multi-omic data sets. In this network, 14 transcription factors, including Myc, coordinately upregulate the gene expression of anabolic processes such as nucleotide synthesis, transcription, and translation, consistent with decreases in metabolites such as nucleotide triphosphates and proteinogenic amino acids required for transcription and translation. Next, as cell growth is required for cell proliferation and insulin can stimulate proliferation in a context-dependent manner, we integrated the trans-omic network with results from a CRISPR functional screen for cell proliferation. This analysis validates the role of a Myc-mediated subnetwork that coordinates the activation of genes involved in anabolic processes required for cell growth. Elsevier 2022-04-08 /pmc/articles/PMC9044165/ /pubmed/35494245 http://dx.doi.org/10.1016/j.isci.2022.104231 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Terakawa, Akira Hu, Yanhui Kokaji, Toshiya Yugi, Katsuyuki Morita, Keigo Ohno, Satoshi Pan, Yifei Bai, Yunfan Parkhitko, Andrey A. Ni, Xiaochun Asara, John M. Bulyk, Martha L. Perrimon, Norbert Kuroda, Shinya Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes |
title | Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes |
title_full | Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes |
title_fullStr | Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes |
title_full_unstemmed | Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes |
title_short | Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes |
title_sort | trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9044165/ https://www.ncbi.nlm.nih.gov/pubmed/35494245 http://dx.doi.org/10.1016/j.isci.2022.104231 |
work_keys_str_mv | AT terakawaakira transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT huyanhui transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT kokajitoshiya transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT yugikatsuyuki transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT moritakeigo transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT ohnosatoshi transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT panyifei transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT baiyunfan transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT parkhitkoandreya transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT nixiaochun transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT asarajohnm transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT bulykmarthal transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT perrimonnorbert transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses AT kurodashinya transomicsanalysisofinsulinactionrevealsacellgrowthsubnetworkwhichcoregulatesanabolicprocesses |