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Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes

Insulin signaling promotes anabolic metabolism to regulate cell growth through multi-omic interactions. To obtain a comprehensive view of the cellular responses to insulin, we constructed a trans-omic network of insulin action in Drosophila cells that involves the integration of multi-omic data sets...

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Autores principales: Terakawa, Akira, Hu, Yanhui, Kokaji, Toshiya, Yugi, Katsuyuki, Morita, Keigo, Ohno, Satoshi, Pan, Yifei, Bai, Yunfan, Parkhitko, Andrey A., Ni, Xiaochun, Asara, John M., Bulyk, Martha L., Perrimon, Norbert, Kuroda, Shinya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9044165/
https://www.ncbi.nlm.nih.gov/pubmed/35494245
http://dx.doi.org/10.1016/j.isci.2022.104231
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author Terakawa, Akira
Hu, Yanhui
Kokaji, Toshiya
Yugi, Katsuyuki
Morita, Keigo
Ohno, Satoshi
Pan, Yifei
Bai, Yunfan
Parkhitko, Andrey A.
Ni, Xiaochun
Asara, John M.
Bulyk, Martha L.
Perrimon, Norbert
Kuroda, Shinya
author_facet Terakawa, Akira
Hu, Yanhui
Kokaji, Toshiya
Yugi, Katsuyuki
Morita, Keigo
Ohno, Satoshi
Pan, Yifei
Bai, Yunfan
Parkhitko, Andrey A.
Ni, Xiaochun
Asara, John M.
Bulyk, Martha L.
Perrimon, Norbert
Kuroda, Shinya
author_sort Terakawa, Akira
collection PubMed
description Insulin signaling promotes anabolic metabolism to regulate cell growth through multi-omic interactions. To obtain a comprehensive view of the cellular responses to insulin, we constructed a trans-omic network of insulin action in Drosophila cells that involves the integration of multi-omic data sets. In this network, 14 transcription factors, including Myc, coordinately upregulate the gene expression of anabolic processes such as nucleotide synthesis, transcription, and translation, consistent with decreases in metabolites such as nucleotide triphosphates and proteinogenic amino acids required for transcription and translation. Next, as cell growth is required for cell proliferation and insulin can stimulate proliferation in a context-dependent manner, we integrated the trans-omic network with results from a CRISPR functional screen for cell proliferation. This analysis validates the role of a Myc-mediated subnetwork that coordinates the activation of genes involved in anabolic processes required for cell growth.
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spelling pubmed-90441652022-04-28 Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes Terakawa, Akira Hu, Yanhui Kokaji, Toshiya Yugi, Katsuyuki Morita, Keigo Ohno, Satoshi Pan, Yifei Bai, Yunfan Parkhitko, Andrey A. Ni, Xiaochun Asara, John M. Bulyk, Martha L. Perrimon, Norbert Kuroda, Shinya iScience Article Insulin signaling promotes anabolic metabolism to regulate cell growth through multi-omic interactions. To obtain a comprehensive view of the cellular responses to insulin, we constructed a trans-omic network of insulin action in Drosophila cells that involves the integration of multi-omic data sets. In this network, 14 transcription factors, including Myc, coordinately upregulate the gene expression of anabolic processes such as nucleotide synthesis, transcription, and translation, consistent with decreases in metabolites such as nucleotide triphosphates and proteinogenic amino acids required for transcription and translation. Next, as cell growth is required for cell proliferation and insulin can stimulate proliferation in a context-dependent manner, we integrated the trans-omic network with results from a CRISPR functional screen for cell proliferation. This analysis validates the role of a Myc-mediated subnetwork that coordinates the activation of genes involved in anabolic processes required for cell growth. Elsevier 2022-04-08 /pmc/articles/PMC9044165/ /pubmed/35494245 http://dx.doi.org/10.1016/j.isci.2022.104231 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Terakawa, Akira
Hu, Yanhui
Kokaji, Toshiya
Yugi, Katsuyuki
Morita, Keigo
Ohno, Satoshi
Pan, Yifei
Bai, Yunfan
Parkhitko, Andrey A.
Ni, Xiaochun
Asara, John M.
Bulyk, Martha L.
Perrimon, Norbert
Kuroda, Shinya
Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes
title Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes
title_full Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes
title_fullStr Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes
title_full_unstemmed Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes
title_short Trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes
title_sort trans-omics analysis of insulin action reveals a cell growth subnetwork which co-regulates anabolic processes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9044165/
https://www.ncbi.nlm.nih.gov/pubmed/35494245
http://dx.doi.org/10.1016/j.isci.2022.104231
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