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The complete chloroplast genome of Euonymus alatus (Celastraceae)

Euonymus alatus, Celastraceae, is a deciduous tree species valued for its ornamental and medicinal properties. Here, the species’ whole chloroplast genome sequence was generated by assembling the Illumina paired-end sequencing reads. The circular genome was 157,611 bp in length, exhibiting a typical...

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Autores principales: Ning, Kun, Zhou, Ting, Wang, Yaolong, El-Kassaby, Yousry A., Ma, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9045756/
https://www.ncbi.nlm.nih.gov/pubmed/35493714
http://dx.doi.org/10.1080/23802359.2022.2067494
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author Ning, Kun
Zhou, Ting
Wang, Yaolong
El-Kassaby, Yousry A.
Ma, Yan
author_facet Ning, Kun
Zhou, Ting
Wang, Yaolong
El-Kassaby, Yousry A.
Ma, Yan
author_sort Ning, Kun
collection PubMed
description Euonymus alatus, Celastraceae, is a deciduous tree species valued for its ornamental and medicinal properties. Here, the species’ whole chloroplast genome sequence was generated by assembling the Illumina paired-end sequencing reads. The circular genome was 157,611 bp in length, exhibiting a typical quadripartite structure with a large single-copy (LSC: 85,892 bp), a small single-copy (SSC: 18,419 bp), and a pair of inverted repeat regions (IRA and IRB: each of 26,650 bp). The chloroplast genome encoded 131 genes, including 87 protein-coding (78 protein-coding gene species), 36 transfer RNA (29 tRNA species), and 8 ribosomal RNA genes (4 rRNA species). The overall GC content was 37.3%, while the corresponding values of the LSC, SSC and IR regions were 35.1, 31.7 and 42.7%, respectively. Phylogenetic analysis of 12 species complete chloroplast genomes suggested that E. alatus was relatively close to E. japonicus. This complete chloroplast genome is expected to provide valuable insight into further phylogenetic reconstruction of the Celastraceae species.
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spelling pubmed-90457562022-04-28 The complete chloroplast genome of Euonymus alatus (Celastraceae) Ning, Kun Zhou, Ting Wang, Yaolong El-Kassaby, Yousry A. Ma, Yan Mitochondrial DNA B Resour Mitogenome Announcement Euonymus alatus, Celastraceae, is a deciduous tree species valued for its ornamental and medicinal properties. Here, the species’ whole chloroplast genome sequence was generated by assembling the Illumina paired-end sequencing reads. The circular genome was 157,611 bp in length, exhibiting a typical quadripartite structure with a large single-copy (LSC: 85,892 bp), a small single-copy (SSC: 18,419 bp), and a pair of inverted repeat regions (IRA and IRB: each of 26,650 bp). The chloroplast genome encoded 131 genes, including 87 protein-coding (78 protein-coding gene species), 36 transfer RNA (29 tRNA species), and 8 ribosomal RNA genes (4 rRNA species). The overall GC content was 37.3%, while the corresponding values of the LSC, SSC and IR regions were 35.1, 31.7 and 42.7%, respectively. Phylogenetic analysis of 12 species complete chloroplast genomes suggested that E. alatus was relatively close to E. japonicus. This complete chloroplast genome is expected to provide valuable insight into further phylogenetic reconstruction of the Celastraceae species. Taylor & Francis 2022-04-25 /pmc/articles/PMC9045756/ /pubmed/35493714 http://dx.doi.org/10.1080/23802359.2022.2067494 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ning, Kun
Zhou, Ting
Wang, Yaolong
El-Kassaby, Yousry A.
Ma, Yan
The complete chloroplast genome of Euonymus alatus (Celastraceae)
title The complete chloroplast genome of Euonymus alatus (Celastraceae)
title_full The complete chloroplast genome of Euonymus alatus (Celastraceae)
title_fullStr The complete chloroplast genome of Euonymus alatus (Celastraceae)
title_full_unstemmed The complete chloroplast genome of Euonymus alatus (Celastraceae)
title_short The complete chloroplast genome of Euonymus alatus (Celastraceae)
title_sort complete chloroplast genome of euonymus alatus (celastraceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9045756/
https://www.ncbi.nlm.nih.gov/pubmed/35493714
http://dx.doi.org/10.1080/23802359.2022.2067494
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