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Paracladopuschiangmaiensis (Podostemaceae), a new generic record for China and its complete plastid genome
The genus Paracladopus was established based on the type species P.chiangmaiensis in 2006. The two Paracladopus species are distributed in Thailand and Laos; however, neither of them has been documented in China to date. During our field work in 2020, we collected a river-weed in Wuzhi Mountain, Hai...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Pensoft Publishers
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9046368/ https://www.ncbi.nlm.nih.gov/pubmed/35800211 http://dx.doi.org/10.3897/phytokeys.195.82789 |
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author | Wu, Mingsong Zhang, Kai Yang, Xinquan Qian, Xin Li, Rongtao Wei, Jianhe |
author_facet | Wu, Mingsong Zhang, Kai Yang, Xinquan Qian, Xin Li, Rongtao Wei, Jianhe |
author_sort | Wu, Mingsong |
collection | PubMed |
description | The genus Paracladopus was established based on the type species P.chiangmaiensis in 2006. The two Paracladopus species are distributed in Thailand and Laos; however, neither of them has been documented in China to date. During our field work in 2020, we collected a river-weed in Wuzhi Mountain, Hainan Province of China. After checking the morphological characters, it was identified as P.chiangmaiensis. Then, we assembled and annotated its chloroplast genome based on the genome skimming data. The results showed that the complete chloroplast genome was 133,748 bp with 35% GC content, consisting of 76 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. A maximum-likelihood tree constructed based on the matk genes showed that WuMS109 was clustered with P.chiangmaiensis (AB537420, AB698348) without base difference and together with the remains of Paracladopus formed a sister clade to Cladopus. This is the first report of P.chiangmaiensis that represents a new generic record for China. The discovery of this river-weed could lay the foundation for investigating their biogeographical patterns and species evolution in further studies. |
format | Online Article Text |
id | pubmed-9046368 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-90463682022-07-06 Paracladopuschiangmaiensis (Podostemaceae), a new generic record for China and its complete plastid genome Wu, Mingsong Zhang, Kai Yang, Xinquan Qian, Xin Li, Rongtao Wei, Jianhe PhytoKeys Research Article The genus Paracladopus was established based on the type species P.chiangmaiensis in 2006. The two Paracladopus species are distributed in Thailand and Laos; however, neither of them has been documented in China to date. During our field work in 2020, we collected a river-weed in Wuzhi Mountain, Hainan Province of China. After checking the morphological characters, it was identified as P.chiangmaiensis. Then, we assembled and annotated its chloroplast genome based on the genome skimming data. The results showed that the complete chloroplast genome was 133,748 bp with 35% GC content, consisting of 76 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. A maximum-likelihood tree constructed based on the matk genes showed that WuMS109 was clustered with P.chiangmaiensis (AB537420, AB698348) without base difference and together with the remains of Paracladopus formed a sister clade to Cladopus. This is the first report of P.chiangmaiensis that represents a new generic record for China. The discovery of this river-weed could lay the foundation for investigating their biogeographical patterns and species evolution in further studies. Pensoft Publishers 2022-04-20 /pmc/articles/PMC9046368/ /pubmed/35800211 http://dx.doi.org/10.3897/phytokeys.195.82789 Text en Mingsong Wu, Kai Zhang, Xinquan Yang, Xin Qian, Rongtao Li, Jianhe Wei https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Wu, Mingsong Zhang, Kai Yang, Xinquan Qian, Xin Li, Rongtao Wei, Jianhe Paracladopuschiangmaiensis (Podostemaceae), a new generic record for China and its complete plastid genome |
title | Paracladopuschiangmaiensis (Podostemaceae), a new generic record for China and its complete plastid genome |
title_full | Paracladopuschiangmaiensis (Podostemaceae), a new generic record for China and its complete plastid genome |
title_fullStr | Paracladopuschiangmaiensis (Podostemaceae), a new generic record for China and its complete plastid genome |
title_full_unstemmed | Paracladopuschiangmaiensis (Podostemaceae), a new generic record for China and its complete plastid genome |
title_short | Paracladopuschiangmaiensis (Podostemaceae), a new generic record for China and its complete plastid genome |
title_sort | paracladopuschiangmaiensis (podostemaceae), a new generic record for china and its complete plastid genome |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9046368/ https://www.ncbi.nlm.nih.gov/pubmed/35800211 http://dx.doi.org/10.3897/phytokeys.195.82789 |
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