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Improving needle visibility in LED-based photoacoustic imaging using deep learning with semi-synthetic datasets
Photoacoustic imaging has shown great potential for guiding minimally invasive procedures by accurate identification of critical tissue targets and invasive medical devices (such as metallic needles). The use of light emitting diodes (LEDs) as the excitation light sources accelerates its clinical tr...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9048160/ https://www.ncbi.nlm.nih.gov/pubmed/35495095 http://dx.doi.org/10.1016/j.pacs.2022.100351 |
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author | Shi, Mengjie Zhao, Tianrui West, Simeon J. Desjardins, Adrien E. Vercauteren, Tom Xia, Wenfeng |
author_facet | Shi, Mengjie Zhao, Tianrui West, Simeon J. Desjardins, Adrien E. Vercauteren, Tom Xia, Wenfeng |
author_sort | Shi, Mengjie |
collection | PubMed |
description | Photoacoustic imaging has shown great potential for guiding minimally invasive procedures by accurate identification of critical tissue targets and invasive medical devices (such as metallic needles). The use of light emitting diodes (LEDs) as the excitation light sources accelerates its clinical translation owing to its high affordability and portability. However, needle visibility in LED-based photoacoustic imaging is compromised primarily due to its low optical fluence. In this work, we propose a deep learning framework based on U-Net to improve the visibility of clinical metallic needles with a LED-based photoacoustic and ultrasound imaging system. To address the complexity of capturing ground truth for real data and the poor realism of purely simulated data, this framework included the generation of semi-synthetic training datasets combining both simulated data to represent features from the needles and in vivo measurements for tissue background. Evaluation of the trained neural network was performed with needle insertions into blood-vessel-mimicking phantoms, pork joint tissue ex vivo and measurements on human volunteers. This deep learning-based framework substantially improved the needle visibility in photoacoustic imaging in vivo compared to conventional reconstruction by suppressing background noise and image artefacts, achieving 5.8 and 4.5 times improvements in terms of signal-to-noise ratio and the modified Hausdorff distance, respectively. Thus, the proposed framework could be helpful for reducing complications during percutaneous needle insertions by accurate identification of clinical needles in photoacoustic imaging. |
format | Online Article Text |
id | pubmed-9048160 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-90481602022-04-29 Improving needle visibility in LED-based photoacoustic imaging using deep learning with semi-synthetic datasets Shi, Mengjie Zhao, Tianrui West, Simeon J. Desjardins, Adrien E. Vercauteren, Tom Xia, Wenfeng Photoacoustics Research Article Photoacoustic imaging has shown great potential for guiding minimally invasive procedures by accurate identification of critical tissue targets and invasive medical devices (such as metallic needles). The use of light emitting diodes (LEDs) as the excitation light sources accelerates its clinical translation owing to its high affordability and portability. However, needle visibility in LED-based photoacoustic imaging is compromised primarily due to its low optical fluence. In this work, we propose a deep learning framework based on U-Net to improve the visibility of clinical metallic needles with a LED-based photoacoustic and ultrasound imaging system. To address the complexity of capturing ground truth for real data and the poor realism of purely simulated data, this framework included the generation of semi-synthetic training datasets combining both simulated data to represent features from the needles and in vivo measurements for tissue background. Evaluation of the trained neural network was performed with needle insertions into blood-vessel-mimicking phantoms, pork joint tissue ex vivo and measurements on human volunteers. This deep learning-based framework substantially improved the needle visibility in photoacoustic imaging in vivo compared to conventional reconstruction by suppressing background noise and image artefacts, achieving 5.8 and 4.5 times improvements in terms of signal-to-noise ratio and the modified Hausdorff distance, respectively. Thus, the proposed framework could be helpful for reducing complications during percutaneous needle insertions by accurate identification of clinical needles in photoacoustic imaging. Elsevier 2022-04-07 /pmc/articles/PMC9048160/ /pubmed/35495095 http://dx.doi.org/10.1016/j.pacs.2022.100351 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Research Article Shi, Mengjie Zhao, Tianrui West, Simeon J. Desjardins, Adrien E. Vercauteren, Tom Xia, Wenfeng Improving needle visibility in LED-based photoacoustic imaging using deep learning with semi-synthetic datasets |
title | Improving needle visibility in LED-based photoacoustic imaging using deep learning with semi-synthetic datasets |
title_full | Improving needle visibility in LED-based photoacoustic imaging using deep learning with semi-synthetic datasets |
title_fullStr | Improving needle visibility in LED-based photoacoustic imaging using deep learning with semi-synthetic datasets |
title_full_unstemmed | Improving needle visibility in LED-based photoacoustic imaging using deep learning with semi-synthetic datasets |
title_short | Improving needle visibility in LED-based photoacoustic imaging using deep learning with semi-synthetic datasets |
title_sort | improving needle visibility in led-based photoacoustic imaging using deep learning with semi-synthetic datasets |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9048160/ https://www.ncbi.nlm.nih.gov/pubmed/35495095 http://dx.doi.org/10.1016/j.pacs.2022.100351 |
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