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Multivalent counterions induced attraction between DNA polyelectrolytes

In this paper we study the electrostatic attraction between two parallel rodlike DNA polyelectrolytes induced by neutralizing multivalent counterions at the zero temperature limit. The counterions crystallize on the charged surfaces of DNA so that we can handle the system by using the Wigner crystal...

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Detalles Bibliográficos
Autores principales: Chen, Xu, Chen, Er-Qiang, Yang, Shuang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9048762/
https://www.ncbi.nlm.nih.gov/pubmed/35494593
http://dx.doi.org/10.1039/c9ra09694a
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author Chen, Xu
Chen, Er-Qiang
Yang, Shuang
author_facet Chen, Xu
Chen, Er-Qiang
Yang, Shuang
author_sort Chen, Xu
collection PubMed
description In this paper we study the electrostatic attraction between two parallel rodlike DNA polyelectrolytes induced by neutralizing multivalent counterions at the zero temperature limit. The counterions crystallize on the charged surfaces of DNA so that we can handle the system by using the Wigner crystal lattice model. We derived the 3D ground state configuration of counterions with minimized energy by use of the gradient descent method, and calculated the interaction between two DNA cylinders with divalent or trivalent counterions when they approach. The results show that the complex ground state configuration of counterions plays a key role in determining the caused attraction. The counterions form three-dimensional Wigner crystals on each cylinder at large separation. When the cylinders are brought together, some counterion lines will move towards the inner region and lead to strong attraction. The calculated interaction from our model is in good agreement with the simulation result, however, the single particle approximation considerably overestimates the attraction.
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spelling pubmed-90487622022-04-28 Multivalent counterions induced attraction between DNA polyelectrolytes Chen, Xu Chen, Er-Qiang Yang, Shuang RSC Adv Chemistry In this paper we study the electrostatic attraction between two parallel rodlike DNA polyelectrolytes induced by neutralizing multivalent counterions at the zero temperature limit. The counterions crystallize on the charged surfaces of DNA so that we can handle the system by using the Wigner crystal lattice model. We derived the 3D ground state configuration of counterions with minimized energy by use of the gradient descent method, and calculated the interaction between two DNA cylinders with divalent or trivalent counterions when they approach. The results show that the complex ground state configuration of counterions plays a key role in determining the caused attraction. The counterions form three-dimensional Wigner crystals on each cylinder at large separation. When the cylinders are brought together, some counterion lines will move towards the inner region and lead to strong attraction. The calculated interaction from our model is in good agreement with the simulation result, however, the single particle approximation considerably overestimates the attraction. The Royal Society of Chemistry 2020-01-09 /pmc/articles/PMC9048762/ /pubmed/35494593 http://dx.doi.org/10.1039/c9ra09694a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Chen, Xu
Chen, Er-Qiang
Yang, Shuang
Multivalent counterions induced attraction between DNA polyelectrolytes
title Multivalent counterions induced attraction between DNA polyelectrolytes
title_full Multivalent counterions induced attraction between DNA polyelectrolytes
title_fullStr Multivalent counterions induced attraction between DNA polyelectrolytes
title_full_unstemmed Multivalent counterions induced attraction between DNA polyelectrolytes
title_short Multivalent counterions induced attraction between DNA polyelectrolytes
title_sort multivalent counterions induced attraction between dna polyelectrolytes
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9048762/
https://www.ncbi.nlm.nih.gov/pubmed/35494593
http://dx.doi.org/10.1039/c9ra09694a
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