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Multivalent counterions induced attraction between DNA polyelectrolytes
In this paper we study the electrostatic attraction between two parallel rodlike DNA polyelectrolytes induced by neutralizing multivalent counterions at the zero temperature limit. The counterions crystallize on the charged surfaces of DNA so that we can handle the system by using the Wigner crystal...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9048762/ https://www.ncbi.nlm.nih.gov/pubmed/35494593 http://dx.doi.org/10.1039/c9ra09694a |
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author | Chen, Xu Chen, Er-Qiang Yang, Shuang |
author_facet | Chen, Xu Chen, Er-Qiang Yang, Shuang |
author_sort | Chen, Xu |
collection | PubMed |
description | In this paper we study the electrostatic attraction between two parallel rodlike DNA polyelectrolytes induced by neutralizing multivalent counterions at the zero temperature limit. The counterions crystallize on the charged surfaces of DNA so that we can handle the system by using the Wigner crystal lattice model. We derived the 3D ground state configuration of counterions with minimized energy by use of the gradient descent method, and calculated the interaction between two DNA cylinders with divalent or trivalent counterions when they approach. The results show that the complex ground state configuration of counterions plays a key role in determining the caused attraction. The counterions form three-dimensional Wigner crystals on each cylinder at large separation. When the cylinders are brought together, some counterion lines will move towards the inner region and lead to strong attraction. The calculated interaction from our model is in good agreement with the simulation result, however, the single particle approximation considerably overestimates the attraction. |
format | Online Article Text |
id | pubmed-9048762 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-90487622022-04-28 Multivalent counterions induced attraction between DNA polyelectrolytes Chen, Xu Chen, Er-Qiang Yang, Shuang RSC Adv Chemistry In this paper we study the electrostatic attraction between two parallel rodlike DNA polyelectrolytes induced by neutralizing multivalent counterions at the zero temperature limit. The counterions crystallize on the charged surfaces of DNA so that we can handle the system by using the Wigner crystal lattice model. We derived the 3D ground state configuration of counterions with minimized energy by use of the gradient descent method, and calculated the interaction between two DNA cylinders with divalent or trivalent counterions when they approach. The results show that the complex ground state configuration of counterions plays a key role in determining the caused attraction. The counterions form three-dimensional Wigner crystals on each cylinder at large separation. When the cylinders are brought together, some counterion lines will move towards the inner region and lead to strong attraction. The calculated interaction from our model is in good agreement with the simulation result, however, the single particle approximation considerably overestimates the attraction. The Royal Society of Chemistry 2020-01-09 /pmc/articles/PMC9048762/ /pubmed/35494593 http://dx.doi.org/10.1039/c9ra09694a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Chen, Xu Chen, Er-Qiang Yang, Shuang Multivalent counterions induced attraction between DNA polyelectrolytes |
title | Multivalent counterions induced attraction between DNA polyelectrolytes |
title_full | Multivalent counterions induced attraction between DNA polyelectrolytes |
title_fullStr | Multivalent counterions induced attraction between DNA polyelectrolytes |
title_full_unstemmed | Multivalent counterions induced attraction between DNA polyelectrolytes |
title_short | Multivalent counterions induced attraction between DNA polyelectrolytes |
title_sort | multivalent counterions induced attraction between dna polyelectrolytes |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9048762/ https://www.ncbi.nlm.nih.gov/pubmed/35494593 http://dx.doi.org/10.1039/c9ra09694a |
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