Cargando…

Quantitative assessment of the nature of noncovalent interactions in N-substituted-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amines: insights from crystallographic and QTAIM analysis

Three adamantane-1,3,4-thiadiazole hybrid derivatives namely; N-ethyl-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amine I, N-(4-fluorophenyl)-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amine II and (4-bromophenyl)-5-(adamantan-1-yl)-N-1,3,4-thiadiazole-2-amine III, have been synthesized and crystal structure...

Descripción completa

Detalles Bibliográficos
Autores principales: El-Emam, Ali A., Saveeth Kumar, Elangovan, Janani, Krishnakumar, Al-Wahaibi, Lamya H., Blacque, Olivier, El-Awady, Mohamed I., Al-Shaalan, Nora H., Percino, M. Judith, Thamotharan, Subbiah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9050220/
https://www.ncbi.nlm.nih.gov/pubmed/35498588
http://dx.doi.org/10.1039/d0ra00733a
_version_ 1784696313222266880
author El-Emam, Ali A.
Saveeth Kumar, Elangovan
Janani, Krishnakumar
Al-Wahaibi, Lamya H.
Blacque, Olivier
El-Awady, Mohamed I.
Al-Shaalan, Nora H.
Percino, M. Judith
Thamotharan, Subbiah
author_facet El-Emam, Ali A.
Saveeth Kumar, Elangovan
Janani, Krishnakumar
Al-Wahaibi, Lamya H.
Blacque, Olivier
El-Awady, Mohamed I.
Al-Shaalan, Nora H.
Percino, M. Judith
Thamotharan, Subbiah
author_sort El-Emam, Ali A.
collection PubMed
description Three adamantane-1,3,4-thiadiazole hybrid derivatives namely; N-ethyl-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amine I, N-(4-fluorophenyl)-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amine II and (4-bromophenyl)-5-(adamantan-1-yl)-N-1,3,4-thiadiazole-2-amine III, have been synthesized and crystal structures have been determined at low temperature. The structures revealed that the orientation of the amino group is different in non-halogenated structures. Intra- and intermolecular interactions were characterized on the basis of the quantum theory of atoms-in-molecules (QTAIM) approach. Intermolecular interaction energies for different molecular pairs have been obtained using the PIXEL method. Hirshfeld surface analysis and 2D-fingerprint plots revealed that the relative contributions of different non-covalent interactions are comparable in compounds with halogen (Br and F) substitutions. Crystal structures of II and III show isostructural behaviour with 1D supramolecular constructs. In all three structures, the N–H⋯N hydrogen bond was found to be stronger among other noncovalent interactions. The H–H bonding showed a closed shell in nature and played significant roles in the stabilization of these crystal structures.
format Online
Article
Text
id pubmed-9050220
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher The Royal Society of Chemistry
record_format MEDLINE/PubMed
spelling pubmed-90502202022-04-29 Quantitative assessment of the nature of noncovalent interactions in N-substituted-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amines: insights from crystallographic and QTAIM analysis El-Emam, Ali A. Saveeth Kumar, Elangovan Janani, Krishnakumar Al-Wahaibi, Lamya H. Blacque, Olivier El-Awady, Mohamed I. Al-Shaalan, Nora H. Percino, M. Judith Thamotharan, Subbiah RSC Adv Chemistry Three adamantane-1,3,4-thiadiazole hybrid derivatives namely; N-ethyl-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amine I, N-(4-fluorophenyl)-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amine II and (4-bromophenyl)-5-(adamantan-1-yl)-N-1,3,4-thiadiazole-2-amine III, have been synthesized and crystal structures have been determined at low temperature. The structures revealed that the orientation of the amino group is different in non-halogenated structures. Intra- and intermolecular interactions were characterized on the basis of the quantum theory of atoms-in-molecules (QTAIM) approach. Intermolecular interaction energies for different molecular pairs have been obtained using the PIXEL method. Hirshfeld surface analysis and 2D-fingerprint plots revealed that the relative contributions of different non-covalent interactions are comparable in compounds with halogen (Br and F) substitutions. Crystal structures of II and III show isostructural behaviour with 1D supramolecular constructs. In all three structures, the N–H⋯N hydrogen bond was found to be stronger among other noncovalent interactions. The H–H bonding showed a closed shell in nature and played significant roles in the stabilization of these crystal structures. The Royal Society of Chemistry 2020-03-06 /pmc/articles/PMC9050220/ /pubmed/35498588 http://dx.doi.org/10.1039/d0ra00733a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
El-Emam, Ali A.
Saveeth Kumar, Elangovan
Janani, Krishnakumar
Al-Wahaibi, Lamya H.
Blacque, Olivier
El-Awady, Mohamed I.
Al-Shaalan, Nora H.
Percino, M. Judith
Thamotharan, Subbiah
Quantitative assessment of the nature of noncovalent interactions in N-substituted-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amines: insights from crystallographic and QTAIM analysis
title Quantitative assessment of the nature of noncovalent interactions in N-substituted-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amines: insights from crystallographic and QTAIM analysis
title_full Quantitative assessment of the nature of noncovalent interactions in N-substituted-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amines: insights from crystallographic and QTAIM analysis
title_fullStr Quantitative assessment of the nature of noncovalent interactions in N-substituted-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amines: insights from crystallographic and QTAIM analysis
title_full_unstemmed Quantitative assessment of the nature of noncovalent interactions in N-substituted-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amines: insights from crystallographic and QTAIM analysis
title_short Quantitative assessment of the nature of noncovalent interactions in N-substituted-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amines: insights from crystallographic and QTAIM analysis
title_sort quantitative assessment of the nature of noncovalent interactions in n-substituted-5-(adamantan-1-yl)-1,3,4-thiadiazole-2-amines: insights from crystallographic and qtaim analysis
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9050220/
https://www.ncbi.nlm.nih.gov/pubmed/35498588
http://dx.doi.org/10.1039/d0ra00733a
work_keys_str_mv AT elemamalia quantitativeassessmentofthenatureofnoncovalentinteractionsinnsubstituted5adamantan1yl134thiadiazole2aminesinsightsfromcrystallographicandqtaimanalysis
AT saveethkumarelangovan quantitativeassessmentofthenatureofnoncovalentinteractionsinnsubstituted5adamantan1yl134thiadiazole2aminesinsightsfromcrystallographicandqtaimanalysis
AT jananikrishnakumar quantitativeassessmentofthenatureofnoncovalentinteractionsinnsubstituted5adamantan1yl134thiadiazole2aminesinsightsfromcrystallographicandqtaimanalysis
AT alwahaibilamyah quantitativeassessmentofthenatureofnoncovalentinteractionsinnsubstituted5adamantan1yl134thiadiazole2aminesinsightsfromcrystallographicandqtaimanalysis
AT blacqueolivier quantitativeassessmentofthenatureofnoncovalentinteractionsinnsubstituted5adamantan1yl134thiadiazole2aminesinsightsfromcrystallographicandqtaimanalysis
AT elawadymohamedi quantitativeassessmentofthenatureofnoncovalentinteractionsinnsubstituted5adamantan1yl134thiadiazole2aminesinsightsfromcrystallographicandqtaimanalysis
AT alshaalannorah quantitativeassessmentofthenatureofnoncovalentinteractionsinnsubstituted5adamantan1yl134thiadiazole2aminesinsightsfromcrystallographicandqtaimanalysis
AT percinomjudith quantitativeassessmentofthenatureofnoncovalentinteractionsinnsubstituted5adamantan1yl134thiadiazole2aminesinsightsfromcrystallographicandqtaimanalysis
AT thamotharansubbiah quantitativeassessmentofthenatureofnoncovalentinteractionsinnsubstituted5adamantan1yl134thiadiazole2aminesinsightsfromcrystallographicandqtaimanalysis