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Scalable in-memory processing of omics workflows

We present a proof of concept implementation of the in-memory computing paradigm that we use to facilitate the analysis of metagenomic sequencing reads. In doing so we compare the performance of POSIX™file systems and key-value storage for omics data, and we show the potential for integrating high-p...

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Detalles Bibliográficos
Autores principales: Elisseev, Vadim, Gardiner, Laura-Jayne, Krishna, Ritesh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Research Network of Computational and Structural Biotechnology 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9052061/
https://www.ncbi.nlm.nih.gov/pubmed/35521547
http://dx.doi.org/10.1016/j.csbj.2022.04.014