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Scalable in-memory processing of omics workflows
We present a proof of concept implementation of the in-memory computing paradigm that we use to facilitate the analysis of metagenomic sequencing reads. In doing so we compare the performance of POSIX™file systems and key-value storage for omics data, and we show the potential for integrating high-p...
Autores principales: | Elisseev, Vadim, Gardiner, Laura-Jayne, Krishna, Ritesh |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Network of Computational and Structural Biotechnology
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9052061/ https://www.ncbi.nlm.nih.gov/pubmed/35521547 http://dx.doi.org/10.1016/j.csbj.2022.04.014 |
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