Cargando…
Investigation of potential descriptors of chemical compounds on prevention of nephrotoxicity via QSAR approach
Drug-induced nephrotoxicity remains a common problem after exposure to medications and diagnostic agents, which may be heightened in the kidney microenvironment and deteriorate kidney function. In this study, the toxic effects of fourteen marked drugs with the individual chemical structure were eval...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Network of Computational and Structural Biotechnology
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9052077/ https://www.ncbi.nlm.nih.gov/pubmed/35521549 http://dx.doi.org/10.1016/j.csbj.2022.04.013 |
_version_ | 1784696708293197824 |
---|---|
author | Huang, Hung-Jin Lee, Yu-Hsuan Chou, Chu-Lin Zheng, Cai-Mei Chiu, Hui-Wen |
author_facet | Huang, Hung-Jin Lee, Yu-Hsuan Chou, Chu-Lin Zheng, Cai-Mei Chiu, Hui-Wen |
author_sort | Huang, Hung-Jin |
collection | PubMed |
description | Drug-induced nephrotoxicity remains a common problem after exposure to medications and diagnostic agents, which may be heightened in the kidney microenvironment and deteriorate kidney function. In this study, the toxic effects of fourteen marked drugs with the individual chemical structure were evaluated in kidney cells. The quantitative structure–activity relationship (QSAR) approach was employed to investigate the potential structural descriptors of each drug-related to their toxic effects. The most reasonable equation of the QSAR model displayed that the estimated regression coefficients such as the number of ring assemblies, three-membered rings, and six-membered rings were strongly related to toxic effects on renal cells. Meanwhile, the chemical properties of the tested compounds including carbon atoms, bridge bonds, H-bond donors, negative atoms, and rotatable bonds were favored properties and promote the toxic effects on renal cells. Particularly, more numbers of rotatable bonds were positively correlated with strong toxic effects that displayed on the most toxic compound. The useful information discovered from our regression QSAR models may help to identify potential hazardous moiety to avoid nephrotoxicity in renal preventive medicine. |
format | Online Article Text |
id | pubmed-9052077 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Research Network of Computational and Structural Biotechnology |
record_format | MEDLINE/PubMed |
spelling | pubmed-90520772022-05-04 Investigation of potential descriptors of chemical compounds on prevention of nephrotoxicity via QSAR approach Huang, Hung-Jin Lee, Yu-Hsuan Chou, Chu-Lin Zheng, Cai-Mei Chiu, Hui-Wen Comput Struct Biotechnol J Research Article Drug-induced nephrotoxicity remains a common problem after exposure to medications and diagnostic agents, which may be heightened in the kidney microenvironment and deteriorate kidney function. In this study, the toxic effects of fourteen marked drugs with the individual chemical structure were evaluated in kidney cells. The quantitative structure–activity relationship (QSAR) approach was employed to investigate the potential structural descriptors of each drug-related to their toxic effects. The most reasonable equation of the QSAR model displayed that the estimated regression coefficients such as the number of ring assemblies, three-membered rings, and six-membered rings were strongly related to toxic effects on renal cells. Meanwhile, the chemical properties of the tested compounds including carbon atoms, bridge bonds, H-bond donors, negative atoms, and rotatable bonds were favored properties and promote the toxic effects on renal cells. Particularly, more numbers of rotatable bonds were positively correlated with strong toxic effects that displayed on the most toxic compound. The useful information discovered from our regression QSAR models may help to identify potential hazardous moiety to avoid nephrotoxicity in renal preventive medicine. Research Network of Computational and Structural Biotechnology 2022-04-15 /pmc/articles/PMC9052077/ /pubmed/35521549 http://dx.doi.org/10.1016/j.csbj.2022.04.013 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Huang, Hung-Jin Lee, Yu-Hsuan Chou, Chu-Lin Zheng, Cai-Mei Chiu, Hui-Wen Investigation of potential descriptors of chemical compounds on prevention of nephrotoxicity via QSAR approach |
title | Investigation of potential descriptors of chemical compounds on prevention of nephrotoxicity via QSAR approach |
title_full | Investigation of potential descriptors of chemical compounds on prevention of nephrotoxicity via QSAR approach |
title_fullStr | Investigation of potential descriptors of chemical compounds on prevention of nephrotoxicity via QSAR approach |
title_full_unstemmed | Investigation of potential descriptors of chemical compounds on prevention of nephrotoxicity via QSAR approach |
title_short | Investigation of potential descriptors of chemical compounds on prevention of nephrotoxicity via QSAR approach |
title_sort | investigation of potential descriptors of chemical compounds on prevention of nephrotoxicity via qsar approach |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9052077/ https://www.ncbi.nlm.nih.gov/pubmed/35521549 http://dx.doi.org/10.1016/j.csbj.2022.04.013 |
work_keys_str_mv | AT huanghungjin investigationofpotentialdescriptorsofchemicalcompoundsonpreventionofnephrotoxicityviaqsarapproach AT leeyuhsuan investigationofpotentialdescriptorsofchemicalcompoundsonpreventionofnephrotoxicityviaqsarapproach AT chouchulin investigationofpotentialdescriptorsofchemicalcompoundsonpreventionofnephrotoxicityviaqsarapproach AT zhengcaimei investigationofpotentialdescriptorsofchemicalcompoundsonpreventionofnephrotoxicityviaqsarapproach AT chiuhuiwen investigationofpotentialdescriptorsofchemicalcompoundsonpreventionofnephrotoxicityviaqsarapproach |