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De Novo Crystal Structure Determination from Machine Learned Chemical Shifts
[Image: see text] Determination of the three-dimensional atomic-level structure of powdered solids is one of the key goals in current chemistry. Solid-state NMR chemical shifts can be used to solve this problem, but they are limited by the high computational cost associated with crystal structure pr...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9052749/ https://www.ncbi.nlm.nih.gov/pubmed/35416661 http://dx.doi.org/10.1021/jacs.1c13733 |
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author | Balodis, Martins Cordova, Manuel Hofstetter, Albert Day, Graeme M. Emsley, Lyndon |
author_facet | Balodis, Martins Cordova, Manuel Hofstetter, Albert Day, Graeme M. Emsley, Lyndon |
author_sort | Balodis, Martins |
collection | PubMed |
description | [Image: see text] Determination of the three-dimensional atomic-level structure of powdered solids is one of the key goals in current chemistry. Solid-state NMR chemical shifts can be used to solve this problem, but they are limited by the high computational cost associated with crystal structure prediction methods and density functional theory chemical shift calculations. Here, we successfully determine the crystal structures of ampicillin, piroxicam, cocaine, and two polymorphs of the drug molecule AZD8329 using on-the-fly generated machine-learned isotropic chemical shifts to directly guide a Monte Carlo-based structure determination process starting from a random gas-phase conformation. |
format | Online Article Text |
id | pubmed-9052749 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-90527492022-05-02 De Novo Crystal Structure Determination from Machine Learned Chemical Shifts Balodis, Martins Cordova, Manuel Hofstetter, Albert Day, Graeme M. Emsley, Lyndon J Am Chem Soc [Image: see text] Determination of the three-dimensional atomic-level structure of powdered solids is one of the key goals in current chemistry. Solid-state NMR chemical shifts can be used to solve this problem, but they are limited by the high computational cost associated with crystal structure prediction methods and density functional theory chemical shift calculations. Here, we successfully determine the crystal structures of ampicillin, piroxicam, cocaine, and two polymorphs of the drug molecule AZD8329 using on-the-fly generated machine-learned isotropic chemical shifts to directly guide a Monte Carlo-based structure determination process starting from a random gas-phase conformation. American Chemical Society 2022-04-13 2022-04-27 /pmc/articles/PMC9052749/ /pubmed/35416661 http://dx.doi.org/10.1021/jacs.1c13733 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Balodis, Martins Cordova, Manuel Hofstetter, Albert Day, Graeme M. Emsley, Lyndon De Novo Crystal Structure Determination from Machine Learned Chemical Shifts |
title | De Novo Crystal Structure Determination
from Machine Learned Chemical Shifts |
title_full | De Novo Crystal Structure Determination
from Machine Learned Chemical Shifts |
title_fullStr | De Novo Crystal Structure Determination
from Machine Learned Chemical Shifts |
title_full_unstemmed | De Novo Crystal Structure Determination
from Machine Learned Chemical Shifts |
title_short | De Novo Crystal Structure Determination
from Machine Learned Chemical Shifts |
title_sort | de novo crystal structure determination
from machine learned chemical shifts |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9052749/ https://www.ncbi.nlm.nih.gov/pubmed/35416661 http://dx.doi.org/10.1021/jacs.1c13733 |
work_keys_str_mv | AT balodismartins denovocrystalstructuredeterminationfrommachinelearnedchemicalshifts AT cordovamanuel denovocrystalstructuredeterminationfrommachinelearnedchemicalshifts AT hofstetteralbert denovocrystalstructuredeterminationfrommachinelearnedchemicalshifts AT daygraemem denovocrystalstructuredeterminationfrommachinelearnedchemicalshifts AT emsleylyndon denovocrystalstructuredeterminationfrommachinelearnedchemicalshifts |