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DFT Calculations for Mössbauer Properties on Dinuclear Center Models of the Resting Oxidized Cytochrome c Oxidase

Mössbauer isomer shift and quadrupole splitting properties have been calculated using the OLYP‐D3(BJ) density functional method on previously obtained (W.‐G. Han Du, et al., Inorg Chem. 2020, 59, 8906–8915) geometry optimized Fe(a3) (3+)−H(2)O−Cu(B) (2+) dinuclear center (DNC) clusters of the restin...

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Autores principales: Han Du, Wen‐Ge, Götz, Andreas W., Noodleman, Louis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9054037/
https://www.ncbi.nlm.nih.gov/pubmed/35142420
http://dx.doi.org/10.1002/cphc.202100831
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author Han Du, Wen‐Ge
Götz, Andreas W.
Noodleman, Louis
author_facet Han Du, Wen‐Ge
Götz, Andreas W.
Noodleman, Louis
author_sort Han Du, Wen‐Ge
collection PubMed
description Mössbauer isomer shift and quadrupole splitting properties have been calculated using the OLYP‐D3(BJ) density functional method on previously obtained (W.‐G. Han Du, et al., Inorg Chem. 2020, 59, 8906–8915) geometry optimized Fe(a3) (3+)−H(2)O−Cu(B) (2+) dinuclear center (DNC) clusters of the resting oxidized (O state) “as‐isolated” cytochrome c oxidase (CcO). The calculated results are highly consistent with the available experimental observations. The calculations have also shown that the structural heterogeneities of the O state DNCs implicated by the Mössbauer experiments are likely consequences of various factors, particularly the variable positions of the central H(2)O molecule between the Fe(a3) (3+) and Cu(B) (2+) sites in different DNCs, whether or not this central H(2)O molecule has H‐bonding interaction with another H(2)O molecule, the different spin states having similar energies for the Fe(a3) (3+) sites, and whether the Fe(a3) (3+) and Cu(B) (2+) sites are ferromagnetically or antiferromagnetically spin‐coupled.
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spelling pubmed-90540372022-04-29 DFT Calculations for Mössbauer Properties on Dinuclear Center Models of the Resting Oxidized Cytochrome c Oxidase Han Du, Wen‐Ge Götz, Andreas W. Noodleman, Louis Chemphyschem Research Articles Mössbauer isomer shift and quadrupole splitting properties have been calculated using the OLYP‐D3(BJ) density functional method on previously obtained (W.‐G. Han Du, et al., Inorg Chem. 2020, 59, 8906–8915) geometry optimized Fe(a3) (3+)−H(2)O−Cu(B) (2+) dinuclear center (DNC) clusters of the resting oxidized (O state) “as‐isolated” cytochrome c oxidase (CcO). The calculated results are highly consistent with the available experimental observations. The calculations have also shown that the structural heterogeneities of the O state DNCs implicated by the Mössbauer experiments are likely consequences of various factors, particularly the variable positions of the central H(2)O molecule between the Fe(a3) (3+) and Cu(B) (2+) sites in different DNCs, whether or not this central H(2)O molecule has H‐bonding interaction with another H(2)O molecule, the different spin states having similar energies for the Fe(a3) (3+) sites, and whether the Fe(a3) (3+) and Cu(B) (2+) sites are ferromagnetically or antiferromagnetically spin‐coupled. John Wiley and Sons Inc. 2022-03-01 2022-04-05 /pmc/articles/PMC9054037/ /pubmed/35142420 http://dx.doi.org/10.1002/cphc.202100831 Text en © 2022 The Authors. ChemPhysChem published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Han Du, Wen‐Ge
Götz, Andreas W.
Noodleman, Louis
DFT Calculations for Mössbauer Properties on Dinuclear Center Models of the Resting Oxidized Cytochrome c Oxidase
title DFT Calculations for Mössbauer Properties on Dinuclear Center Models of the Resting Oxidized Cytochrome c Oxidase
title_full DFT Calculations for Mössbauer Properties on Dinuclear Center Models of the Resting Oxidized Cytochrome c Oxidase
title_fullStr DFT Calculations for Mössbauer Properties on Dinuclear Center Models of the Resting Oxidized Cytochrome c Oxidase
title_full_unstemmed DFT Calculations for Mössbauer Properties on Dinuclear Center Models of the Resting Oxidized Cytochrome c Oxidase
title_short DFT Calculations for Mössbauer Properties on Dinuclear Center Models of the Resting Oxidized Cytochrome c Oxidase
title_sort dft calculations for mössbauer properties on dinuclear center models of the resting oxidized cytochrome c oxidase
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9054037/
https://www.ncbi.nlm.nih.gov/pubmed/35142420
http://dx.doi.org/10.1002/cphc.202100831
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