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Cycle-consistent adversarial networks improves generalizability of radiomics model in grading meningiomas on external validation
The heterogeneity of MRI is one of the major reasons for decreased performance of a radiomics model on external validation, limiting the model’s generalizability and clinical application. We aimed to establish a generalizable radiomics model to predict meningioma grade on external validation through...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9055063/ https://www.ncbi.nlm.nih.gov/pubmed/35488007 http://dx.doi.org/10.1038/s41598-022-10956-9 |
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author | Park, Yae Won Shin, Seo Jeong Eom, Jihwan Lee, Heirim You, Seng Chan Ahn, Sung Soo Lim, Soo Mee Park, Rae Woong Lee, Seung-Koo |
author_facet | Park, Yae Won Shin, Seo Jeong Eom, Jihwan Lee, Heirim You, Seng Chan Ahn, Sung Soo Lim, Soo Mee Park, Rae Woong Lee, Seung-Koo |
author_sort | Park, Yae Won |
collection | PubMed |
description | The heterogeneity of MRI is one of the major reasons for decreased performance of a radiomics model on external validation, limiting the model’s generalizability and clinical application. We aimed to establish a generalizable radiomics model to predict meningioma grade on external validation through leveraging Cycle-Consistent Adversarial Networks (CycleGAN). In this retrospective study, 257 patients with meningioma were included in the institutional training set. Radiomic features (n = 214) were extracted from T2-weighted (T2) and contrast-enhanced T1 (T1C) images. After radiomics feature selection, extreme gradient boosting classifiers were developed. The models were validated in the external validation set consisting of 61 patients with meningiomas. To reduce the gap in generalization associated with the inter-institutional heterogeneity of MRI, the smaller image set style of the external validation was translated into the larger image set style of the institutional training set using CycleGAN. On external validation before CycleGAN application, the performance of the combined T2 and T1C models showed an area under the curve (AUC), accuracy, and F1 score of 0.77 (95% confidence interval 0.63–0.91), 70.7%, and 0.54, respectively. After applying CycleGAN, the performance of the combined T2 and T1C models increased, with an AUC, accuracy, and F1 score of 0.83 (95% confidence interval 0.70–0.97), 73.2%, and 0.59, respectively. Quantitative metrics (by Fréchet Inception Distance) showed that CycleGAN can decrease inter-institutional image heterogeneity while preserving predictive information. In conclusion, leveraging CycleGAN may be helpful to increase the generalizability of a radiomics model in differentiating meningioma grade on external validation. |
format | Online Article Text |
id | pubmed-9055063 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-90550632022-05-01 Cycle-consistent adversarial networks improves generalizability of radiomics model in grading meningiomas on external validation Park, Yae Won Shin, Seo Jeong Eom, Jihwan Lee, Heirim You, Seng Chan Ahn, Sung Soo Lim, Soo Mee Park, Rae Woong Lee, Seung-Koo Sci Rep Article The heterogeneity of MRI is one of the major reasons for decreased performance of a radiomics model on external validation, limiting the model’s generalizability and clinical application. We aimed to establish a generalizable radiomics model to predict meningioma grade on external validation through leveraging Cycle-Consistent Adversarial Networks (CycleGAN). In this retrospective study, 257 patients with meningioma were included in the institutional training set. Radiomic features (n = 214) were extracted from T2-weighted (T2) and contrast-enhanced T1 (T1C) images. After radiomics feature selection, extreme gradient boosting classifiers were developed. The models were validated in the external validation set consisting of 61 patients with meningiomas. To reduce the gap in generalization associated with the inter-institutional heterogeneity of MRI, the smaller image set style of the external validation was translated into the larger image set style of the institutional training set using CycleGAN. On external validation before CycleGAN application, the performance of the combined T2 and T1C models showed an area under the curve (AUC), accuracy, and F1 score of 0.77 (95% confidence interval 0.63–0.91), 70.7%, and 0.54, respectively. After applying CycleGAN, the performance of the combined T2 and T1C models increased, with an AUC, accuracy, and F1 score of 0.83 (95% confidence interval 0.70–0.97), 73.2%, and 0.59, respectively. Quantitative metrics (by Fréchet Inception Distance) showed that CycleGAN can decrease inter-institutional image heterogeneity while preserving predictive information. In conclusion, leveraging CycleGAN may be helpful to increase the generalizability of a radiomics model in differentiating meningioma grade on external validation. Nature Publishing Group UK 2022-04-29 /pmc/articles/PMC9055063/ /pubmed/35488007 http://dx.doi.org/10.1038/s41598-022-10956-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Park, Yae Won Shin, Seo Jeong Eom, Jihwan Lee, Heirim You, Seng Chan Ahn, Sung Soo Lim, Soo Mee Park, Rae Woong Lee, Seung-Koo Cycle-consistent adversarial networks improves generalizability of radiomics model in grading meningiomas on external validation |
title | Cycle-consistent adversarial networks improves generalizability of radiomics model in grading meningiomas on external validation |
title_full | Cycle-consistent adversarial networks improves generalizability of radiomics model in grading meningiomas on external validation |
title_fullStr | Cycle-consistent adversarial networks improves generalizability of radiomics model in grading meningiomas on external validation |
title_full_unstemmed | Cycle-consistent adversarial networks improves generalizability of radiomics model in grading meningiomas on external validation |
title_short | Cycle-consistent adversarial networks improves generalizability of radiomics model in grading meningiomas on external validation |
title_sort | cycle-consistent adversarial networks improves generalizability of radiomics model in grading meningiomas on external validation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9055063/ https://www.ncbi.nlm.nih.gov/pubmed/35488007 http://dx.doi.org/10.1038/s41598-022-10956-9 |
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