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Bioinformatics network analyses of growth differentiation factor 11

Growth differentiation factor 11 (GDF11) has been implicated in rejuvenating functions in age-related diseases. The molecular mechanisms connecting GDF11 with these anti-aging phenomena, including reverse age-related cardiac hypertrophy and vascular and neurogenic rejuvenation, remain unclear. In th...

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Detalles Bibliográficos
Autores principales: Zhang, Feng, Yang, Xia, Bao, Zhijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: De Gruyter 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9055169/
https://www.ncbi.nlm.nih.gov/pubmed/35582621
http://dx.doi.org/10.1515/biol-2022-0044
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author Zhang, Feng
Yang, Xia
Bao, Zhijun
author_facet Zhang, Feng
Yang, Xia
Bao, Zhijun
author_sort Zhang, Feng
collection PubMed
description Growth differentiation factor 11 (GDF11) has been implicated in rejuvenating functions in age-related diseases. The molecular mechanisms connecting GDF11 with these anti-aging phenomena, including reverse age-related cardiac hypertrophy and vascular and neurogenic rejuvenation, remain unclear. In this study, we sought to uncover the molecular functions of GDF11 using bioinformatics and network-driven analyses at the human gene and transcription levels using the gene co-expression network analysis, the protein–protein interaction network analysis, and the transcription factor network analysis. Our findings suggested that GDF11 is involved in a variety of functions, such as apoptosis, DNA repair, telomere maintenance, and interaction with key transcription factors, such as MYC proto-oncogene, specificity protein 1, and ETS proto-oncogene 2. The human skin fibroblast premature senescence model was established by UVB. The treatment with 10 ng/mL GDF11 in this cell model could reduce cell damage, reduce the apoptosis rate and the expression of caspase-3, and increase the length of telomeres. Therefore, our findings shed light on the functions of GDF11 and provide insights into the roles of GDF11 in aging.
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spelling pubmed-90551692022-05-16 Bioinformatics network analyses of growth differentiation factor 11 Zhang, Feng Yang, Xia Bao, Zhijun Open Life Sci Research Article Growth differentiation factor 11 (GDF11) has been implicated in rejuvenating functions in age-related diseases. The molecular mechanisms connecting GDF11 with these anti-aging phenomena, including reverse age-related cardiac hypertrophy and vascular and neurogenic rejuvenation, remain unclear. In this study, we sought to uncover the molecular functions of GDF11 using bioinformatics and network-driven analyses at the human gene and transcription levels using the gene co-expression network analysis, the protein–protein interaction network analysis, and the transcription factor network analysis. Our findings suggested that GDF11 is involved in a variety of functions, such as apoptosis, DNA repair, telomere maintenance, and interaction with key transcription factors, such as MYC proto-oncogene, specificity protein 1, and ETS proto-oncogene 2. The human skin fibroblast premature senescence model was established by UVB. The treatment with 10 ng/mL GDF11 in this cell model could reduce cell damage, reduce the apoptosis rate and the expression of caspase-3, and increase the length of telomeres. Therefore, our findings shed light on the functions of GDF11 and provide insights into the roles of GDF11 in aging. De Gruyter 2022-04-26 /pmc/articles/PMC9055169/ /pubmed/35582621 http://dx.doi.org/10.1515/biol-2022-0044 Text en © 2022 Feng Zhang et al., published by De Gruyter https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License.
spellingShingle Research Article
Zhang, Feng
Yang, Xia
Bao, Zhijun
Bioinformatics network analyses of growth differentiation factor 11
title Bioinformatics network analyses of growth differentiation factor 11
title_full Bioinformatics network analyses of growth differentiation factor 11
title_fullStr Bioinformatics network analyses of growth differentiation factor 11
title_full_unstemmed Bioinformatics network analyses of growth differentiation factor 11
title_short Bioinformatics network analyses of growth differentiation factor 11
title_sort bioinformatics network analyses of growth differentiation factor 11
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9055169/
https://www.ncbi.nlm.nih.gov/pubmed/35582621
http://dx.doi.org/10.1515/biol-2022-0044
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