Cargando…

Evaluation of CSTB and DMBT1 expression in saliva of gastric cancer patients and controls

BACKGROUND: Gastric cancer (GC) is the fifth most common cancer and the third cause of cancer deaths globally, with late diagnosis, low survival rate, and poor prognosis. This case-control study aimed to evaluate the expression of cystatin B (CSTB) and deleted in malignant brain tumor 1 (DMBT1) in t...

Descripción completa

Detalles Bibliográficos
Autores principales: Koopaie, Maryam, Ghafourian, Marjan, Manifar, Soheila, Younespour, Shima, Davoudi, Mansour, Kolahdooz, Sajad, Shirkhoda, Mohammad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9055774/
https://www.ncbi.nlm.nih.gov/pubmed/35488257
http://dx.doi.org/10.1186/s12885-022-09570-9
_version_ 1784697487917842432
author Koopaie, Maryam
Ghafourian, Marjan
Manifar, Soheila
Younespour, Shima
Davoudi, Mansour
Kolahdooz, Sajad
Shirkhoda, Mohammad
author_facet Koopaie, Maryam
Ghafourian, Marjan
Manifar, Soheila
Younespour, Shima
Davoudi, Mansour
Kolahdooz, Sajad
Shirkhoda, Mohammad
author_sort Koopaie, Maryam
collection PubMed
description BACKGROUND: Gastric cancer (GC) is the fifth most common cancer and the third cause of cancer deaths globally, with late diagnosis, low survival rate, and poor prognosis. This case-control study aimed to evaluate the expression of cystatin B (CSTB) and deleted in malignant brain tumor 1 (DMBT1) in the saliva of GC patients with healthy individuals to construct diagnostic algorithms using statistical analysis and machine learning methods. METHODS: Demographic data, clinical characteristics, and food intake habits of the case and control group were gathered through a standard checklist. Unstimulated whole saliva samples were taken from 31 healthy individuals and 31 GC patients. Through ELISA test and statistical analysis, the expression of salivary CSTB and DMBT1 proteins was evaluated. To construct diagnostic algorithms, we used the machine learning method. RESULTS: The mean salivary expression of CSTB in GC patients was significantly lower (115.55 ± 7.06, p = 0.001), and the mean salivary expression of DMBT1 in GC patients was significantly higher (171.88 ± 39.67, p = 0.002) than the control. Multiple linear regression analysis demonstrated that GC was significantly correlated with high levels of DMBT1 after controlling the effects of age of participants (R(2) = 0.20, p < 0.001). Considering salivary CSTB greater than 119.06 ng/mL as an optimal cut-off value, the sensitivity and specificity of CSTB in the diagnosis of GC were 83.87 and 70.97%, respectively. The area under the ROC curve was calculated as 0.728. The optimal cut-off value of DMBT1 for differentiating GC patients from controls was greater than 146.33 ng/mL (sensitivity = 80.65% and specificity = 64.52%). The area under the ROC curve was up to 0.741. As a result of the machine learning method, the area under the receiver-operating characteristic curve for the diagnostic ability of CSTB, DMBT1, demographic data, clinical characteristics, and food intake habits was 0.95. The machine learning model’s sensitivity, specificity, and accuracy were 100, 70.8, and 80.5%, respectively. CONCLUSION: Salivary levels of DMBT1 and CSTB may be accurate in diagnosing GCs. Machine learning analyses using salivary biomarkers, demographic, clinical, and nutrition habits data simultaneously could provide affordability models with acceptable accuracy for differentiation of GC by a cost-effective and non-invasive method.
format Online
Article
Text
id pubmed-9055774
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-90557742022-05-01 Evaluation of CSTB and DMBT1 expression in saliva of gastric cancer patients and controls Koopaie, Maryam Ghafourian, Marjan Manifar, Soheila Younespour, Shima Davoudi, Mansour Kolahdooz, Sajad Shirkhoda, Mohammad BMC Cancer Research BACKGROUND: Gastric cancer (GC) is the fifth most common cancer and the third cause of cancer deaths globally, with late diagnosis, low survival rate, and poor prognosis. This case-control study aimed to evaluate the expression of cystatin B (CSTB) and deleted in malignant brain tumor 1 (DMBT1) in the saliva of GC patients with healthy individuals to construct diagnostic algorithms using statistical analysis and machine learning methods. METHODS: Demographic data, clinical characteristics, and food intake habits of the case and control group were gathered through a standard checklist. Unstimulated whole saliva samples were taken from 31 healthy individuals and 31 GC patients. Through ELISA test and statistical analysis, the expression of salivary CSTB and DMBT1 proteins was evaluated. To construct diagnostic algorithms, we used the machine learning method. RESULTS: The mean salivary expression of CSTB in GC patients was significantly lower (115.55 ± 7.06, p = 0.001), and the mean salivary expression of DMBT1 in GC patients was significantly higher (171.88 ± 39.67, p = 0.002) than the control. Multiple linear regression analysis demonstrated that GC was significantly correlated with high levels of DMBT1 after controlling the effects of age of participants (R(2) = 0.20, p < 0.001). Considering salivary CSTB greater than 119.06 ng/mL as an optimal cut-off value, the sensitivity and specificity of CSTB in the diagnosis of GC were 83.87 and 70.97%, respectively. The area under the ROC curve was calculated as 0.728. The optimal cut-off value of DMBT1 for differentiating GC patients from controls was greater than 146.33 ng/mL (sensitivity = 80.65% and specificity = 64.52%). The area under the ROC curve was up to 0.741. As a result of the machine learning method, the area under the receiver-operating characteristic curve for the diagnostic ability of CSTB, DMBT1, demographic data, clinical characteristics, and food intake habits was 0.95. The machine learning model’s sensitivity, specificity, and accuracy were 100, 70.8, and 80.5%, respectively. CONCLUSION: Salivary levels of DMBT1 and CSTB may be accurate in diagnosing GCs. Machine learning analyses using salivary biomarkers, demographic, clinical, and nutrition habits data simultaneously could provide affordability models with acceptable accuracy for differentiation of GC by a cost-effective and non-invasive method. BioMed Central 2022-04-30 /pmc/articles/PMC9055774/ /pubmed/35488257 http://dx.doi.org/10.1186/s12885-022-09570-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Koopaie, Maryam
Ghafourian, Marjan
Manifar, Soheila
Younespour, Shima
Davoudi, Mansour
Kolahdooz, Sajad
Shirkhoda, Mohammad
Evaluation of CSTB and DMBT1 expression in saliva of gastric cancer patients and controls
title Evaluation of CSTB and DMBT1 expression in saliva of gastric cancer patients and controls
title_full Evaluation of CSTB and DMBT1 expression in saliva of gastric cancer patients and controls
title_fullStr Evaluation of CSTB and DMBT1 expression in saliva of gastric cancer patients and controls
title_full_unstemmed Evaluation of CSTB and DMBT1 expression in saliva of gastric cancer patients and controls
title_short Evaluation of CSTB and DMBT1 expression in saliva of gastric cancer patients and controls
title_sort evaluation of cstb and dmbt1 expression in saliva of gastric cancer patients and controls
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9055774/
https://www.ncbi.nlm.nih.gov/pubmed/35488257
http://dx.doi.org/10.1186/s12885-022-09570-9
work_keys_str_mv AT koopaiemaryam evaluationofcstbanddmbt1expressioninsalivaofgastriccancerpatientsandcontrols
AT ghafourianmarjan evaluationofcstbanddmbt1expressioninsalivaofgastriccancerpatientsandcontrols
AT manifarsoheila evaluationofcstbanddmbt1expressioninsalivaofgastriccancerpatientsandcontrols
AT younespourshima evaluationofcstbanddmbt1expressioninsalivaofgastriccancerpatientsandcontrols
AT davoudimansour evaluationofcstbanddmbt1expressioninsalivaofgastriccancerpatientsandcontrols
AT kolahdoozsajad evaluationofcstbanddmbt1expressioninsalivaofgastriccancerpatientsandcontrols
AT shirkhodamohammad evaluationofcstbanddmbt1expressioninsalivaofgastriccancerpatientsandcontrols