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Recent advances in the chemo-biological characterization of decalin natural products and unraveling of the workings of Diels–Alderases

The Diels–Alder (DA) reaction refers to a [4 + 2] cycloaddition reaction that falls under the category of pericyclic reactions. It is a reaction that allows regio- and stereo-selective construction of two carbon–carbon bonds simultaneously in a concerted manner to generate a six-membered ring struct...

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Autores principales: Watanabe, Kenji, Sato, Michio, Osada, Hiroyuki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9055775/
https://www.ncbi.nlm.nih.gov/pubmed/35488322
http://dx.doi.org/10.1186/s40694-022-00139-6
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author Watanabe, Kenji
Sato, Michio
Osada, Hiroyuki
author_facet Watanabe, Kenji
Sato, Michio
Osada, Hiroyuki
author_sort Watanabe, Kenji
collection PubMed
description The Diels–Alder (DA) reaction refers to a [4 + 2] cycloaddition reaction that falls under the category of pericyclic reactions. It is a reaction that allows regio- and stereo-selective construction of two carbon–carbon bonds simultaneously in a concerted manner to generate a six-membered ring structure through a six-electron cyclic transition state. The DA reaction is one of the most widely applied reactions in organic synthesis, yet its role in biological systems has been debated intensely over the last four decades. A survey of secondary metabolites produced by microorganisms suggests strongly that many of the compounds possess features that are likely formed through DA reactions, and most of them are considered to be catalyzed by enzymes that are commonly referred to as Diels–Alderases (DAases). In recent years, especially over the past 10 years or so, we have seen an accumulation of a substantial body of work that substantiates the argument that DAases indeed exist and play a critical role in the biosynthesis of complex metabolites. This review will cover the DAases involved in the biosynthesis of decalin moieties, which are found in many of the medicinally important natural products, especially those produced by fungi. In particular, we will focus on a subset of secondary metabolites referred to as pyrrolidine-2-one-bearing decalin compounds and discuss the decalin ring stereochemistry and the biological activities of those compounds. We will also look into the genes and enzymes that drive the biosynthetic construction of those complex natural products, and highlight the recent progress made on the structural and mechanistic understanding of DAases, especially regarding how those enzymes exert stereochemical control over the [4 + 2] cycloaddition reactions they catalyze.
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spelling pubmed-90557752022-05-01 Recent advances in the chemo-biological characterization of decalin natural products and unraveling of the workings of Diels–Alderases Watanabe, Kenji Sato, Michio Osada, Hiroyuki Fungal Biol Biotechnol Review The Diels–Alder (DA) reaction refers to a [4 + 2] cycloaddition reaction that falls under the category of pericyclic reactions. It is a reaction that allows regio- and stereo-selective construction of two carbon–carbon bonds simultaneously in a concerted manner to generate a six-membered ring structure through a six-electron cyclic transition state. The DA reaction is one of the most widely applied reactions in organic synthesis, yet its role in biological systems has been debated intensely over the last four decades. A survey of secondary metabolites produced by microorganisms suggests strongly that many of the compounds possess features that are likely formed through DA reactions, and most of them are considered to be catalyzed by enzymes that are commonly referred to as Diels–Alderases (DAases). In recent years, especially over the past 10 years or so, we have seen an accumulation of a substantial body of work that substantiates the argument that DAases indeed exist and play a critical role in the biosynthesis of complex metabolites. This review will cover the DAases involved in the biosynthesis of decalin moieties, which are found in many of the medicinally important natural products, especially those produced by fungi. In particular, we will focus on a subset of secondary metabolites referred to as pyrrolidine-2-one-bearing decalin compounds and discuss the decalin ring stereochemistry and the biological activities of those compounds. We will also look into the genes and enzymes that drive the biosynthetic construction of those complex natural products, and highlight the recent progress made on the structural and mechanistic understanding of DAases, especially regarding how those enzymes exert stereochemical control over the [4 + 2] cycloaddition reactions they catalyze. BioMed Central 2022-04-29 /pmc/articles/PMC9055775/ /pubmed/35488322 http://dx.doi.org/10.1186/s40694-022-00139-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Review
Watanabe, Kenji
Sato, Michio
Osada, Hiroyuki
Recent advances in the chemo-biological characterization of decalin natural products and unraveling of the workings of Diels–Alderases
title Recent advances in the chemo-biological characterization of decalin natural products and unraveling of the workings of Diels–Alderases
title_full Recent advances in the chemo-biological characterization of decalin natural products and unraveling of the workings of Diels–Alderases
title_fullStr Recent advances in the chemo-biological characterization of decalin natural products and unraveling of the workings of Diels–Alderases
title_full_unstemmed Recent advances in the chemo-biological characterization of decalin natural products and unraveling of the workings of Diels–Alderases
title_short Recent advances in the chemo-biological characterization of decalin natural products and unraveling of the workings of Diels–Alderases
title_sort recent advances in the chemo-biological characterization of decalin natural products and unraveling of the workings of diels–alderases
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9055775/
https://www.ncbi.nlm.nih.gov/pubmed/35488322
http://dx.doi.org/10.1186/s40694-022-00139-6
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