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Understanding the role of galectin inhibitors as potential candidates for SARS-CoV-2 spike protein: in silico studies

The Severe Acute Respiratory Syndrome Corona Virus 2 (SARS-CoV-2) has been rapidly transmitting and leaving its footprints across the globe. Stringent measures like complete lockdown and extensive testing have been employed by many countries to slow it down in its tracks until a viable treatment is...

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Autores principales: Sethi, Aaftaab, Sanam, Swetha, Munagalasetty, Sharon, Jayanthi, Sivaraman, Alvala, Mallika
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9056307/
https://www.ncbi.nlm.nih.gov/pubmed/35518264
http://dx.doi.org/10.1039/d0ra04795c
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author Sethi, Aaftaab
Sanam, Swetha
Munagalasetty, Sharon
Jayanthi, Sivaraman
Alvala, Mallika
author_facet Sethi, Aaftaab
Sanam, Swetha
Munagalasetty, Sharon
Jayanthi, Sivaraman
Alvala, Mallika
author_sort Sethi, Aaftaab
collection PubMed
description The Severe Acute Respiratory Syndrome Corona Virus 2 (SARS-CoV-2) has been rapidly transmitting and leaving its footprints across the globe. Stringent measures like complete lockdown and extensive testing have been employed by many countries to slow it down in its tracks until a viable treatment is found. Therefore, in the current scenario, prompt solutions need to be uncovered to tackle the virus. In the present study, 330 galectin inhibitors were tested against SARS-CoV-2 spike (S) protein with the aid of molecular docking and molecular dynamics. Finally, the binding free energy and contributing energies were calculated for 2 top scoring ligands by using MM–GBSA method. Many of the galectin inhibitors displayed high binding score against the S protein. They were found to bind to the site of contact of S protein to ACE2. Thus, they show promise of disrupting the ACE2–S protein binding and prevent the virus from invading the host cell. Among the ligands screened, TD-139, a molecule currently in Phase IIb clinical trials, was found to be a potential hit. The present study paves the way for in vitro and in vivo testing of galectin inhibitors against SARS-CoV-2. In addition, it warrants a swift examination of TD-139 for treating COVID-19.
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spelling pubmed-90563072022-05-04 Understanding the role of galectin inhibitors as potential candidates for SARS-CoV-2 spike protein: in silico studies Sethi, Aaftaab Sanam, Swetha Munagalasetty, Sharon Jayanthi, Sivaraman Alvala, Mallika RSC Adv Chemistry The Severe Acute Respiratory Syndrome Corona Virus 2 (SARS-CoV-2) has been rapidly transmitting and leaving its footprints across the globe. Stringent measures like complete lockdown and extensive testing have been employed by many countries to slow it down in its tracks until a viable treatment is found. Therefore, in the current scenario, prompt solutions need to be uncovered to tackle the virus. In the present study, 330 galectin inhibitors were tested against SARS-CoV-2 spike (S) protein with the aid of molecular docking and molecular dynamics. Finally, the binding free energy and contributing energies were calculated for 2 top scoring ligands by using MM–GBSA method. Many of the galectin inhibitors displayed high binding score against the S protein. They were found to bind to the site of contact of S protein to ACE2. Thus, they show promise of disrupting the ACE2–S protein binding and prevent the virus from invading the host cell. Among the ligands screened, TD-139, a molecule currently in Phase IIb clinical trials, was found to be a potential hit. The present study paves the way for in vitro and in vivo testing of galectin inhibitors against SARS-CoV-2. In addition, it warrants a swift examination of TD-139 for treating COVID-19. The Royal Society of Chemistry 2020-08-13 /pmc/articles/PMC9056307/ /pubmed/35518264 http://dx.doi.org/10.1039/d0ra04795c Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Sethi, Aaftaab
Sanam, Swetha
Munagalasetty, Sharon
Jayanthi, Sivaraman
Alvala, Mallika
Understanding the role of galectin inhibitors as potential candidates for SARS-CoV-2 spike protein: in silico studies
title Understanding the role of galectin inhibitors as potential candidates for SARS-CoV-2 spike protein: in silico studies
title_full Understanding the role of galectin inhibitors as potential candidates for SARS-CoV-2 spike protein: in silico studies
title_fullStr Understanding the role of galectin inhibitors as potential candidates for SARS-CoV-2 spike protein: in silico studies
title_full_unstemmed Understanding the role of galectin inhibitors as potential candidates for SARS-CoV-2 spike protein: in silico studies
title_short Understanding the role of galectin inhibitors as potential candidates for SARS-CoV-2 spike protein: in silico studies
title_sort understanding the role of galectin inhibitors as potential candidates for sars-cov-2 spike protein: in silico studies
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9056307/
https://www.ncbi.nlm.nih.gov/pubmed/35518264
http://dx.doi.org/10.1039/d0ra04795c
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