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Anomalous dynamics of water at the octopeptide lanreotide surface
This work reports the study of water dynamics close to the cyclic octapeptide lanreotide from atomistic simulations of hydrated lanreotide, a cyclic octapeptide. Calculation of the hydrogen bonds between water molecules allows mapping of the hydrophilic regions of lanreotide. Whereas a super-diffusi...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9056749/ https://www.ncbi.nlm.nih.gov/pubmed/35519054 http://dx.doi.org/10.1039/d0ra06237e |
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author | Pinzan, Florian Artzner, Franck Ghoufi, Aziz |
author_facet | Pinzan, Florian Artzner, Franck Ghoufi, Aziz |
author_sort | Pinzan, Florian |
collection | PubMed |
description | This work reports the study of water dynamics close to the cyclic octapeptide lanreotide from atomistic simulations of hydrated lanreotide, a cyclic octapeptide. Calculation of the hydrogen bonds between water molecules allows mapping of the hydrophilic regions of lanreotide. Whereas a super-diffusivity of the interfacial water molecules is established, a slowdown in rotational dynamics is observed, involving a decoupling between both processes. Acceleration in translation dynamics is connected to the hopping process between hydrophilic zones. Microscopically, this is correlated with the weakness of the interfacial hydrogen bonding network due to a hydrophobic interface at the origin of the interfacial sliding of water molecules. Heterogeneous rotational dynamics of water molecules close the lanreotide surface is evidenced and connected to heterogeneous hydration. |
format | Online Article Text |
id | pubmed-9056749 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-90567492022-05-04 Anomalous dynamics of water at the octopeptide lanreotide surface Pinzan, Florian Artzner, Franck Ghoufi, Aziz RSC Adv Chemistry This work reports the study of water dynamics close to the cyclic octapeptide lanreotide from atomistic simulations of hydrated lanreotide, a cyclic octapeptide. Calculation of the hydrogen bonds between water molecules allows mapping of the hydrophilic regions of lanreotide. Whereas a super-diffusivity of the interfacial water molecules is established, a slowdown in rotational dynamics is observed, involving a decoupling between both processes. Acceleration in translation dynamics is connected to the hopping process between hydrophilic zones. Microscopically, this is correlated with the weakness of the interfacial hydrogen bonding network due to a hydrophobic interface at the origin of the interfacial sliding of water molecules. Heterogeneous rotational dynamics of water molecules close the lanreotide surface is evidenced and connected to heterogeneous hydration. The Royal Society of Chemistry 2020-09-14 /pmc/articles/PMC9056749/ /pubmed/35519054 http://dx.doi.org/10.1039/d0ra06237e Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/ |
spellingShingle | Chemistry Pinzan, Florian Artzner, Franck Ghoufi, Aziz Anomalous dynamics of water at the octopeptide lanreotide surface |
title | Anomalous dynamics of water at the octopeptide lanreotide surface |
title_full | Anomalous dynamics of water at the octopeptide lanreotide surface |
title_fullStr | Anomalous dynamics of water at the octopeptide lanreotide surface |
title_full_unstemmed | Anomalous dynamics of water at the octopeptide lanreotide surface |
title_short | Anomalous dynamics of water at the octopeptide lanreotide surface |
title_sort | anomalous dynamics of water at the octopeptide lanreotide surface |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9056749/ https://www.ncbi.nlm.nih.gov/pubmed/35519054 http://dx.doi.org/10.1039/d0ra06237e |
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