Cargando…

Anomalous dynamics of water at the octopeptide lanreotide surface

This work reports the study of water dynamics close to the cyclic octapeptide lanreotide from atomistic simulations of hydrated lanreotide, a cyclic octapeptide. Calculation of the hydrogen bonds between water molecules allows mapping of the hydrophilic regions of lanreotide. Whereas a super-diffusi...

Descripción completa

Detalles Bibliográficos
Autores principales: Pinzan, Florian, Artzner, Franck, Ghoufi, Aziz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9056749/
https://www.ncbi.nlm.nih.gov/pubmed/35519054
http://dx.doi.org/10.1039/d0ra06237e
_version_ 1784697734779895808
author Pinzan, Florian
Artzner, Franck
Ghoufi, Aziz
author_facet Pinzan, Florian
Artzner, Franck
Ghoufi, Aziz
author_sort Pinzan, Florian
collection PubMed
description This work reports the study of water dynamics close to the cyclic octapeptide lanreotide from atomistic simulations of hydrated lanreotide, a cyclic octapeptide. Calculation of the hydrogen bonds between water molecules allows mapping of the hydrophilic regions of lanreotide. Whereas a super-diffusivity of the interfacial water molecules is established, a slowdown in rotational dynamics is observed, involving a decoupling between both processes. Acceleration in translation dynamics is connected to the hopping process between hydrophilic zones. Microscopically, this is correlated with the weakness of the interfacial hydrogen bonding network due to a hydrophobic interface at the origin of the interfacial sliding of water molecules. Heterogeneous rotational dynamics of water molecules close the lanreotide surface is evidenced and connected to heterogeneous hydration.
format Online
Article
Text
id pubmed-9056749
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher The Royal Society of Chemistry
record_format MEDLINE/PubMed
spelling pubmed-90567492022-05-04 Anomalous dynamics of water at the octopeptide lanreotide surface Pinzan, Florian Artzner, Franck Ghoufi, Aziz RSC Adv Chemistry This work reports the study of water dynamics close to the cyclic octapeptide lanreotide from atomistic simulations of hydrated lanreotide, a cyclic octapeptide. Calculation of the hydrogen bonds between water molecules allows mapping of the hydrophilic regions of lanreotide. Whereas a super-diffusivity of the interfacial water molecules is established, a slowdown in rotational dynamics is observed, involving a decoupling between both processes. Acceleration in translation dynamics is connected to the hopping process between hydrophilic zones. Microscopically, this is correlated with the weakness of the interfacial hydrogen bonding network due to a hydrophobic interface at the origin of the interfacial sliding of water molecules. Heterogeneous rotational dynamics of water molecules close the lanreotide surface is evidenced and connected to heterogeneous hydration. The Royal Society of Chemistry 2020-09-14 /pmc/articles/PMC9056749/ /pubmed/35519054 http://dx.doi.org/10.1039/d0ra06237e Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Pinzan, Florian
Artzner, Franck
Ghoufi, Aziz
Anomalous dynamics of water at the octopeptide lanreotide surface
title Anomalous dynamics of water at the octopeptide lanreotide surface
title_full Anomalous dynamics of water at the octopeptide lanreotide surface
title_fullStr Anomalous dynamics of water at the octopeptide lanreotide surface
title_full_unstemmed Anomalous dynamics of water at the octopeptide lanreotide surface
title_short Anomalous dynamics of water at the octopeptide lanreotide surface
title_sort anomalous dynamics of water at the octopeptide lanreotide surface
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9056749/
https://www.ncbi.nlm.nih.gov/pubmed/35519054
http://dx.doi.org/10.1039/d0ra06237e
work_keys_str_mv AT pinzanflorian anomalousdynamicsofwaterattheoctopeptidelanreotidesurface
AT artznerfranck anomalousdynamicsofwaterattheoctopeptidelanreotidesurface
AT ghoufiaziz anomalousdynamicsofwaterattheoctopeptidelanreotidesurface