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Isolation, expression, and biochemical characterization: nitrite reductase from Bacillus cereus LJ01

Biological remediation of toxic oxygen-containing anions such as nitrate that are common in the environment is of great significance. Therefore, it is necessary to understand the specific role of nitrate and nitrite reductase in the bioremediation process. Bacillus cereus LJ01, which was isolated fr...

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Detalles Bibliográficos
Autores principales: Huang, Yan-yan, Liang, Ming-hua, Zhao, Shan, Chen, Si-min, Liu, Jin-song, Liu, Dong-mei, Lu, Yong-zhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9057199/
https://www.ncbi.nlm.nih.gov/pubmed/35515171
http://dx.doi.org/10.1039/d0ra06129h
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author Huang, Yan-yan
Liang, Ming-hua
Zhao, Shan
Chen, Si-min
Liu, Jin-song
Liu, Dong-mei
Lu, Yong-zhi
author_facet Huang, Yan-yan
Liang, Ming-hua
Zhao, Shan
Chen, Si-min
Liu, Jin-song
Liu, Dong-mei
Lu, Yong-zhi
author_sort Huang, Yan-yan
collection PubMed
description Biological remediation of toxic oxygen-containing anions such as nitrate that are common in the environment is of great significance. Therefore, it is necessary to understand the specific role of nitrate and nitrite reductase in the bioremediation process. Bacillus cereus LJ01, which was isolated from traditional Chinese soybean paste, effectively degraded nitrite (such as NaNO(2)) at 0–15 mmol L(−1) in LB medium. Moreover, the nitrite-degrading active substance (ASDN) was isolated and purified from B. cereus LJ01. The nitrite-degrading activity of nitrite reductase (named LJ01-NiR) was 4004.89 U mg(−1). The gene encoding the assimilation of nitrite reductase in B. cereus LJ01 was cloned and overexpressed in E. coli. The purified recombinant LJ01-NiR has a wide range of activities under temperature (20–60 °C), pH (6.5–8.0) and metal ions (Fe(3+), Fe(2+), Cu(2+), Mn(2+), and Al(3+)). Kinetic parameters of LJ01-NiR, including the values of K(m) and V(max) were 1.38 mM and 2.00 μmol g(−1) min(−1), respectively. The results showed that LJ01-NiR could degrade nitrite with or without an electron donor. In addition, sequence analysis revealed that LJ01-NiR was a ferredoxin-dependent nitrite reductase given the presence of conserved [Fe4–S4] cluster and heme-binding domain. The nitrite ion binds to the LJ01-NiR active site by forming three hydrogen bonds with the residues ASN72, ALA133 and ASN140. Due to its high nitrite-degrading activity, LJ01-NiR could potentially be used for environmental pollution treatment.
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spelling pubmed-90571992022-05-04 Isolation, expression, and biochemical characterization: nitrite reductase from Bacillus cereus LJ01 Huang, Yan-yan Liang, Ming-hua Zhao, Shan Chen, Si-min Liu, Jin-song Liu, Dong-mei Lu, Yong-zhi RSC Adv Chemistry Biological remediation of toxic oxygen-containing anions such as nitrate that are common in the environment is of great significance. Therefore, it is necessary to understand the specific role of nitrate and nitrite reductase in the bioremediation process. Bacillus cereus LJ01, which was isolated from traditional Chinese soybean paste, effectively degraded nitrite (such as NaNO(2)) at 0–15 mmol L(−1) in LB medium. Moreover, the nitrite-degrading active substance (ASDN) was isolated and purified from B. cereus LJ01. The nitrite-degrading activity of nitrite reductase (named LJ01-NiR) was 4004.89 U mg(−1). The gene encoding the assimilation of nitrite reductase in B. cereus LJ01 was cloned and overexpressed in E. coli. The purified recombinant LJ01-NiR has a wide range of activities under temperature (20–60 °C), pH (6.5–8.0) and metal ions (Fe(3+), Fe(2+), Cu(2+), Mn(2+), and Al(3+)). Kinetic parameters of LJ01-NiR, including the values of K(m) and V(max) were 1.38 mM and 2.00 μmol g(−1) min(−1), respectively. The results showed that LJ01-NiR could degrade nitrite with or without an electron donor. In addition, sequence analysis revealed that LJ01-NiR was a ferredoxin-dependent nitrite reductase given the presence of conserved [Fe4–S4] cluster and heme-binding domain. The nitrite ion binds to the LJ01-NiR active site by forming three hydrogen bonds with the residues ASN72, ALA133 and ASN140. Due to its high nitrite-degrading activity, LJ01-NiR could potentially be used for environmental pollution treatment. The Royal Society of Chemistry 2020-10-14 /pmc/articles/PMC9057199/ /pubmed/35515171 http://dx.doi.org/10.1039/d0ra06129h Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Huang, Yan-yan
Liang, Ming-hua
Zhao, Shan
Chen, Si-min
Liu, Jin-song
Liu, Dong-mei
Lu, Yong-zhi
Isolation, expression, and biochemical characterization: nitrite reductase from Bacillus cereus LJ01
title Isolation, expression, and biochemical characterization: nitrite reductase from Bacillus cereus LJ01
title_full Isolation, expression, and biochemical characterization: nitrite reductase from Bacillus cereus LJ01
title_fullStr Isolation, expression, and biochemical characterization: nitrite reductase from Bacillus cereus LJ01
title_full_unstemmed Isolation, expression, and biochemical characterization: nitrite reductase from Bacillus cereus LJ01
title_short Isolation, expression, and biochemical characterization: nitrite reductase from Bacillus cereus LJ01
title_sort isolation, expression, and biochemical characterization: nitrite reductase from bacillus cereus lj01
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9057199/
https://www.ncbi.nlm.nih.gov/pubmed/35515171
http://dx.doi.org/10.1039/d0ra06129h
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