Cargando…
Serological profiling reveals hsa-miR-451a as a possible biomarker of anaphylaxis
BACKGROUND: There is a need to support the diagnosis of anaphylaxis by objective markers. miRNAs are promising noncoding RNA species that may serve as serological biomarkers, but their use in diagnosing anaphylaxis has not been systematically studied to our knowledge. We aimed to comprehensively inv...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Clinical Investigation
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9057591/ https://www.ncbi.nlm.nih.gov/pubmed/35202004 http://dx.doi.org/10.1172/jci.insight.156669 |
_version_ | 1784697932781453312 |
---|---|
author | Francuzik, Wojciech Pažur, Kristijan Dalke, Magdalena Dölle-Bierke, Sabine Babina, Magda Worm, Margitta |
author_facet | Francuzik, Wojciech Pažur, Kristijan Dalke, Magdalena Dölle-Bierke, Sabine Babina, Magda Worm, Margitta |
author_sort | Francuzik, Wojciech |
collection | PubMed |
description | BACKGROUND: There is a need to support the diagnosis of anaphylaxis by objective markers. miRNAs are promising noncoding RNA species that may serve as serological biomarkers, but their use in diagnosing anaphylaxis has not been systematically studied to our knowledge. We aimed to comprehensively investigate serum biomarker profiles (proteins, lipids, and miRNAs) to support the diagnosis of anaphylaxis. METHODS: Adult patients admitted to the emergency room with a diagnosis of anaphylaxis (<3 hours) were included. Blood samples were taken upon emergency room arrival and 1 month later. RESULTS: Next-generation sequencing of 18 samples (6 patients with anaphylaxis in both acute and nonacute condition, for 12 total samples, and 6 healthy controls) identified hsa-miR-451a to be elevated during anaphylaxis, which was verified by quantitative real-time PCR in the remaining cohort. The random forest classifier enabled us to classify anaphylaxis with high accuracy using a composite model. We identified tryptase, 9α,11β-PGF2, apolipoprotein A1, and hsa-miR-451a as serological biomarkers of anaphylaxis. These predictors qualified as serological biomarkers individually but performed better in combination. CONCLUSION: Unexpectedly, hsa-miR-451a was identified as the most relevant biomarker in our data set. We were also able to distinguish between patients with a history of anaphylaxis and healthy individuals with higher accuracy than any other available model. Future studies will need to verify miRNA biomarker utility in real-life clinical settings. FUNDING: This work is funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) as part of the clinical research unit (CRU339): Food Allergy and Tolerance (FOOD@) (project number 409525714) and a grant to MW (Wo541-16-2, project number 264921598), as well as by FOOD@ project numbers 428094283 and 428447634. |
format | Online Article Text |
id | pubmed-9057591 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Society for Clinical Investigation |
record_format | MEDLINE/PubMed |
spelling | pubmed-90575912022-05-04 Serological profiling reveals hsa-miR-451a as a possible biomarker of anaphylaxis Francuzik, Wojciech Pažur, Kristijan Dalke, Magdalena Dölle-Bierke, Sabine Babina, Magda Worm, Margitta JCI Insight Clinical Medicine BACKGROUND: There is a need to support the diagnosis of anaphylaxis by objective markers. miRNAs are promising noncoding RNA species that may serve as serological biomarkers, but their use in diagnosing anaphylaxis has not been systematically studied to our knowledge. We aimed to comprehensively investigate serum biomarker profiles (proteins, lipids, and miRNAs) to support the diagnosis of anaphylaxis. METHODS: Adult patients admitted to the emergency room with a diagnosis of anaphylaxis (<3 hours) were included. Blood samples were taken upon emergency room arrival and 1 month later. RESULTS: Next-generation sequencing of 18 samples (6 patients with anaphylaxis in both acute and nonacute condition, for 12 total samples, and 6 healthy controls) identified hsa-miR-451a to be elevated during anaphylaxis, which was verified by quantitative real-time PCR in the remaining cohort. The random forest classifier enabled us to classify anaphylaxis with high accuracy using a composite model. We identified tryptase, 9α,11β-PGF2, apolipoprotein A1, and hsa-miR-451a as serological biomarkers of anaphylaxis. These predictors qualified as serological biomarkers individually but performed better in combination. CONCLUSION: Unexpectedly, hsa-miR-451a was identified as the most relevant biomarker in our data set. We were also able to distinguish between patients with a history of anaphylaxis and healthy individuals with higher accuracy than any other available model. Future studies will need to verify miRNA biomarker utility in real-life clinical settings. FUNDING: This work is funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) as part of the clinical research unit (CRU339): Food Allergy and Tolerance (FOOD@) (project number 409525714) and a grant to MW (Wo541-16-2, project number 264921598), as well as by FOOD@ project numbers 428094283 and 428447634. American Society for Clinical Investigation 2022-04-08 /pmc/articles/PMC9057591/ /pubmed/35202004 http://dx.doi.org/10.1172/jci.insight.156669 Text en © 2022 Francuzik et al. https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Clinical Medicine Francuzik, Wojciech Pažur, Kristijan Dalke, Magdalena Dölle-Bierke, Sabine Babina, Magda Worm, Margitta Serological profiling reveals hsa-miR-451a as a possible biomarker of anaphylaxis |
title | Serological profiling reveals hsa-miR-451a as a possible biomarker of anaphylaxis |
title_full | Serological profiling reveals hsa-miR-451a as a possible biomarker of anaphylaxis |
title_fullStr | Serological profiling reveals hsa-miR-451a as a possible biomarker of anaphylaxis |
title_full_unstemmed | Serological profiling reveals hsa-miR-451a as a possible biomarker of anaphylaxis |
title_short | Serological profiling reveals hsa-miR-451a as a possible biomarker of anaphylaxis |
title_sort | serological profiling reveals hsa-mir-451a as a possible biomarker of anaphylaxis |
topic | Clinical Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9057591/ https://www.ncbi.nlm.nih.gov/pubmed/35202004 http://dx.doi.org/10.1172/jci.insight.156669 |
work_keys_str_mv | AT francuzikwojciech serologicalprofilingrevealshsamir451aasapossiblebiomarkerofanaphylaxis AT pazurkristijan serologicalprofilingrevealshsamir451aasapossiblebiomarkerofanaphylaxis AT dalkemagdalena serologicalprofilingrevealshsamir451aasapossiblebiomarkerofanaphylaxis AT dollebierkesabine serologicalprofilingrevealshsamir451aasapossiblebiomarkerofanaphylaxis AT babinamagda serologicalprofilingrevealshsamir451aasapossiblebiomarkerofanaphylaxis AT wormmargitta serologicalprofilingrevealshsamir451aasapossiblebiomarkerofanaphylaxis |